Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0718
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 30 0.40
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 29 0.54
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 28 1.6
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 26 5.0
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.6
SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase |Schizo... 26 6.6
SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6 |Sc... 26 6.6
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 26 6.6
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 25 8.7
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 25 8.7
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 25 8.7
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 25 8.7
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 8.7
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 8.7
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.40
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +3
Query: 132 WENIAPIYFSLPQENRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSIIGFSVHRMV 311
W N P + PQE R AA +++ G+ ++ L +YG +I +
Sbjct: 227 WNNSCPNPLTNPQEFRVAASAKIQQLLQGNREKFLSRNPSKPLSSVYGSELINQAGDDNN 286
Query: 312 KLMSRHSEYPVYYYVFSYI 368
K ++ E + Y +F +
Sbjct: 287 KPFHKYEESAIVYPLFQCV 305
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 29.5 bits (63), Expect = 0.54
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +3
Query: 408 PAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARH--GDPNNCGDTPEI 581
P GA+H DD I + + Y ++ +++ D A + H D E
Sbjct: 203 PIGASH-DDLIVLARRYYDIEERKSQDKVTNITDSQPAPYMKEIIHLWSDGRLIDFLRER 261
Query: 582 GVPVAGVRPRQAAVPGTWGDRLTVRKNYAEDRFQLW 689
+P++ + PR+ + + +R T R A + W
Sbjct: 262 NIPISVLSPRETLLKEAYANRFTPRVMIASNVLDGW 297
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 480 SVWWGTGTTE*VRRWCRRGEQLQLVSRCQD 391
S+ G G T +WC GE+L + SRC D
Sbjct: 250 SIERGNGVTH--LQWCEDGEKLYVGSRCSD 277
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 634 HVPGTAAWRGRTPATGTPISGVSP 563
HV GTA R +TP+T ++ V P
Sbjct: 80 HVTGTAENRPQTPSTKASVANVKP 103
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 640 SPHVPGTAAWRGRTPATGTPISGVSPQ 560
S + G A W G P+ G+SPQ
Sbjct: 259 STEIGGDAVWVNAVRQGGDPLQGISPQ 285
>SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 360
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 PVLQNETLLDELNNDWENIAPIYFSLPQENRTAAVRELRAQY 212
PV+ + +D ++ + N P YF PQ+ R + + A Y
Sbjct: 306 PVVYSHRTMDGFSDYYYNGIPAYFQNPQKARYMLMLSINAGY 347
>SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 644 SVSPRPRYCCLAGSYSGHRDPDLR 573
SV P+P+YC + G + + DP R
Sbjct: 60 SVLPQPKYCDVTGLLAIYTDPKTR 83
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 69 FFWKAPPVLQNETLLDEL 122
FFWK P ++NE L+ ++
Sbjct: 403 FFWKIDPYIRNERLVSQM 420
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 577 RSGSRWPEYDPAK 615
R+G RW EYDP K
Sbjct: 295 RNGLRWYEYDPTK 307
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 413 WSCSPRRHHLRTHSVVPVPHHTDGQPRLP 499
++C R L HS VP P+ P +P
Sbjct: 376 YTCLVARAELEVHSTVPEPNDAIENPEIP 404
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 PVLQNETLLDELNNDWENIAPIYFSLPQENRTAAVRELRAQY 212
PV+ + +D ++ + N P YF PQ+ R + + A Y
Sbjct: 306 PVVYSHRTMDGFSDYYYNGIPSYFQNPQKARYMLMLSINAGY 347
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 28 AHRAAHHQPNQGTSSS 75
AH AHHQP Q T++S
Sbjct: 129 AHANAHHQPAQTTTTS 144
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 179 DGRGEGAEGAVPRGRPAAERRALHPRPRQT 268
+G G G RGR R HPRP Q+
Sbjct: 638 EGHGTGMRTNRGRGRGGRMNRMQHPRPLQS 667
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 99 NETLLDELNNDWENIAPI 152
NE L+D+L N+ ENIA +
Sbjct: 1013 NERLMDDLKNNGENIASL 1030
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 532 TSLDTAIQTTAATPRRSGSRWPEY 603
++LDT + + A TPRR S P Y
Sbjct: 362 SNLDTPLPSGATTPRRRDSMEPTY 385
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,019,881
Number of Sequences: 5004
Number of extensions: 61270
Number of successful extensions: 196
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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