Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0718
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical ... 56 2e-08
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 55 6e-08
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 55 6e-08
AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical ... 51 1e-06
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 47 1e-05
U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 43 2e-04
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 43 2e-04
AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical ... 42 6e-04
AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical ... 39 0.003
AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical ... 38 0.008
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 35 0.054
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 32 0.38
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 32 0.38
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 29 4.7
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 29 4.7
AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical ... 29 4.7
AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical ... 29 4.7
Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical pr... 28 6.2
X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein. 28 6.2
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 28 6.2
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 28 8.1
>AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical
protein C52A10.2 protein.
Length = 544
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 174 NRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYY 353
NR V+ YL +G N+E + L ++GD V+ + ++ VY Y
Sbjct: 362 NREEVVKRAAESYLKNGGNENEENIAKTLVEIFGDYYFSVGAFDTVRSLVKYGN-TVYLY 420
Query: 354 VFSYIGNNSYYVDPGTGKPAGAAHH-DDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWY 530
F+Y N+ V G +P AA+H D Y+ + T + D V+D M
Sbjct: 421 SFNYFNPNTPIVF-GKNRPFNAANHGSDLRYIFGEG----TGEFSKEDRQVMDMMGTYHT 475
Query: 531 NFARHGDPNNCG 566
NFA++G+PN G
Sbjct: 476 NFAKYGNPNGKG 487
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 54.8 bits (126), Expect = 6e-08
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +3
Query: 219 DGPLRNDERSTRA-LGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDP 395
+G ++DE + R L GD V + K ++H VY+Y F Y+ +S+ +
Sbjct: 378 EGVDKSDELAMRKKLCEALGDEFFNVGVIQAAKNAAKHGN-EVYFYTFEYVNPDSFGMWD 436
Query: 396 GTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTP 575
G A H + Y+L + + + D V++ T ++ NFA++G+PN G T
Sbjct: 437 GMMPFKAAVHCTELRYLLGEGV-YSKFEPTEEDRKVMETTTTLFSNFAKYGNPNGKGATA 495
Query: 576 EIGVPVAGVRPRQ 614
EI + RP +
Sbjct: 496 EIWEKYSLNRPER 508
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 54.8 bits (126), Expect = 6e-08
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +3
Query: 219 DGPLRNDERSTRA-LGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDP 395
+G ++DE + R L GD V + K ++H VY+Y F Y+ +S+ +
Sbjct: 378 EGVDKSDELAMRKKLCEALGDEFFNVGVIQAAKNAAKHGN-EVYFYTFEYVNPDSFGMWD 436
Query: 396 GTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTP 575
G A H + Y+L + + + D V++ T ++ NFA++G+PN G T
Sbjct: 437 GMMPFKAAVHCTELRYLLGEGV-YSKFEPTEEDRKVMETTTTLFSNFAKYGNPNGKGATA 495
Query: 576 EIGVPVAGVRPRQ 614
EI + RP +
Sbjct: 496 EIWEKYSLNRPER 508
>AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical
protein Y71H2AM.13 protein.
Length = 550
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +3
Query: 222 GPLRNDERSTRALGRLYGDSIIGFSVHRMV-KLMSRHSEYPVYYYVFSYIGNNSYYVDPG 398
G + E RA+ L GDS + + + V ++ P+Y Y F Y +Y + G
Sbjct: 381 GTDHSKEEWQRAMVDLKGDSFLNVGIQQNVLDVLETQPSTPIYMYSFDYCNPKAYGI-MG 439
Query: 399 TGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGD 569
P A H I + ++ + + D +++ T +W NFA++G+PN GD
Sbjct: 440 FKLPFKDATHCTDISYVVGNHIVNSFDFNEEDYKMIEITTRLWTNFAKYGNPNGEGD 496
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/118 (24%), Positives = 57/118 (48%)
Frame = +3
Query: 231 RNDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKP 410
++ E++ + + GD I + +R+ +M+ ++ VY+Y F Y + + V
Sbjct: 270 KDHEKNMHQIVKFIGDYSINYGTYRLANIMT-DLQHDVYFYQFDYHNSAGFGVFRWLLPF 328
Query: 411 AGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTPEIG 584
G+ H + YVL + + + D ++ MT + NFA++G+PN G+ E G
Sbjct: 329 LGSTHCTEMRYVLGKGI-ISKFRPNDNDKKMLHVMTTYFTNFAKYGNPN--GENQETG 383
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/118 (24%), Positives = 57/118 (48%)
Frame = +3
Query: 231 RNDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKP 410
++ E++ + + GD I + +R+ +M+ ++ VY+Y F Y + + V
Sbjct: 387 KDHEKNMHQIVKFIGDYSINYGTYRLANIMT-DLQHDVYFYQFDYHNSAGFGVFRWLLPF 445
Query: 411 AGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTPEIG 584
G+ H + YVL + + + D ++ MT + NFA++G+PN G+ E G
Sbjct: 446 LGSTHCTEMRYVLGKGI-ISKFRPNDNDKKMLHVMTTYFTNFAKYGNPN--GENQETG 500
>U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical
protein F15A8.6 protein.
Length = 565
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +3
Query: 171 ENRTAAVRELRAQYLGDGPLRNDERSTRALG--RLYGDSIIGFSVHRMVKLMSRHSEYPV 344
E+ A E + YL D++ A G +LY D + + + M++ V
Sbjct: 381 EDFEALREEAKKMYLKKLSDDEDDKEVAARGYIQLYSDLFVNNGTYNYAEKMTKLGN-KV 439
Query: 345 YYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAI 524
+ Y F Y S+ + A H + Y+ S F +S D ++D MT +
Sbjct: 440 FMYSFDYCNPRSFGILSLRAPFRAATHCTELAYIFGVSIVFNYRYNES-DRAMLDLMTKM 498
Query: 525 WYNFARHGDPN 557
W NFA++G+PN
Sbjct: 499 WTNFAKYGNPN 509
>U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical
protein K11G9.3 protein.
Length = 517
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +3
Query: 237 DERSTRA-LGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPA 413
DE+ST+ L GD++ V K +H V+ Y+F Y + +
Sbjct: 351 DEKSTKERLIDFVGDALFTAGVFDNAKNCLKHGNN-VWLYIFDYCNPSGFGNQEEFMTFV 409
Query: 414 GAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDT 572
H D YVL + + Q + ++++MT I+ NFA++G+PN G +
Sbjct: 410 APTHCTDLRYVLGEGL-YSDFQPTEEEHKMIEKMTTIYSNFAKYGNPNEHGSS 461
>U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical
protein K11G9.2 protein.
Length = 529
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +3
Query: 237 DERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKP-A 413
DE R L G S+ V + ++R VY+YVF + N + G+ P
Sbjct: 369 DESEERKLVDYIGHSVYNAGVLLSAESLARAGNC-VYFYVFDF-WNPDGFGPVGSIVPFK 426
Query: 414 GAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDT 572
GAAH + Y++ + + + D +++ MT ++ NFA++G+PN G T
Sbjct: 427 GAAHCSELRYIIGEGV-YSKFDANEKDLKMMEYMTTMFTNFAKYGNPNIPGVT 478
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 342 VYYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTA 521
V++YVF Y + G H D Y+L + + + D D ++DEMT
Sbjct: 219 VWFYVFDYTNPAGFGCLDEIMPFVGPTHCTDLRYLLGEGL-YSDFKPDDTDWKMIDEMTT 277
Query: 522 IWYNFARHGDPN 557
++ NFA++G+PN
Sbjct: 278 LYTNFAKYGNPN 289
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 342 VYYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTA 521
V++YVF Y + G H D Y+L + + + D D ++DEMT
Sbjct: 435 VWFYVFDYTNPAGFGCLDEIMPFVGPTHCTDLRYLLGEGL-YSDFKPDDTDWKMIDEMTT 493
Query: 522 IWYNFARHGDPN 557
++ NFA++G+PN
Sbjct: 494 LYTNFAKYGNPN 505
>AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical
protein B0238.1 protein.
Length = 545
Score = 42.3 bits (95), Expect = 4e-04
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Frame = +3
Query: 174 NRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYY 353
NR V++ YL + ++ E+ + L ++GD V V+ ++++ VY
Sbjct: 363 NREEVVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYYFSVGVFDTVRSLAKYGNN-VYLS 421
Query: 354 VFSYIGNNSYYVDPGTGKPAGAAHHD-DTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWY 530
F+Y N + G +P AA H D Y+L + D V+D M
Sbjct: 422 SFNYF-NPETPIMFGENRPFNAASHGCDIRYILGDGIG----EFSKEDRKVMDMMGTYLT 476
Query: 531 NFARHGDPNNCG 566
NFA++G+PN G
Sbjct: 477 NFAKYGNPNGKG 488
>AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical
protein F13H6.4 protein.
Length = 405
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/116 (21%), Positives = 52/116 (44%)
Frame = +3
Query: 234 NDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPA 413
+D + L +GD V + K +++ V+ Y F Y ++ + +
Sbjct: 235 DDSAMKKRLCEAFGDLGFNLGVFQSAKSSAKYGN-DVFLYSFEYYHSDGFGMWKDLLPFE 293
Query: 414 GAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTPEI 581
+ H + Y+L + + + + V+++ T ++ NFA++G+PN G T EI
Sbjct: 294 ASMHGTELRYLLGEGF-YSKFDATKEELEVLEKTTTLFSNFAKYGNPNGTGVTDEI 348
>AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical
protein B0238.13 protein.
Length = 811
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/105 (25%), Positives = 44/105 (41%)
Frame = +3
Query: 171 ENRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYY 350
+NR V++ YL + N++ + L +YGD V+ + ++ VY
Sbjct: 687 KNREEVVKKAEESYLKNAGNGNEKNVAKTLVEIYGDYYFSVGAFDTVRSLVKYGN-TVYL 745
Query: 351 YVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTD 485
Y F+Y N+ V G +P AA + +Y TIQ D
Sbjct: 746 YSFNYFNPNTPIVF-GKNRPFNAAIQMEKVYRFHGKSTVLTIQED 789
>AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical
protein C52A10.1 protein.
Length = 545
Score = 37.9 bits (84), Expect = 0.008
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Frame = +3
Query: 105 TLLDELNNDWENIAPIYFSLPQENRTAAVRELRAQYLGDGPLRNDERSTRALGRLYGDSI 284
T+ ND + I + S EN + + Y+ + +D+ + L +L DS
Sbjct: 338 TMFQSRRNDMDIIKSSFGSDVVENAVDVQKRIMEFYMKNIDKNDDKAVEKRLIQLISDSW 397
Query: 285 IGFSVHRMVKLMSRHSEYPVYYYVFSY--IGNNSYYVDPGTGKPAGAAHHDDTI-YVLTQ 455
VK +++ Y F Y +G+N Y T P AA+H + Y+L +
Sbjct: 398 FNIGALETVKTSTKYGSN-AYLGSFDYYNMGSNDPYA---TWFPFKAANHGSELKYMLGE 453
Query: 456 SY-QFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDTPEI 581
+F I+ + V+D M + NF ++G+PN + PE+
Sbjct: 454 GMGKFSPIEEEFK---VIDMMGTLTANFVKYGNPNGI-NGPEL 492
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/113 (21%), Positives = 45/113 (39%)
Frame = +3
Query: 234 NDERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPA 413
++E R GDSI V + + H + V+ Y F Y + + G
Sbjct: 401 DEEAIMRKAAEFVGDSIFHTGVRATAQNAAEHGD-EVWLYNFDYCNPDGFAPLKGYLPYI 459
Query: 414 GAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGDT 572
H + Y+ + + ++D+ T ++ NFA++G+PN G +
Sbjct: 460 EPTHGMELRYLFGDGI-ISKFEPTEEELKMLDKFTTMFANFAKYGNPNETGSS 511
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/105 (20%), Positives = 41/105 (39%)
Frame = +3
Query: 255 ALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPAGAAHHDD 434
A+ ++ GD SV+ M ++H YYY F++ + + + G H +
Sbjct: 418 AMDKMLGDYHFTCSVNEMALAHTKHGG-DTYYYYFTHRASQQTWPEW-----MGVLHGYE 471
Query: 435 TIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGD 569
++ + + + + W NFA+ GDPN D
Sbjct: 472 INFIFGEPLNQKRFNYTDEERELSNRFMRYWANFAKTGDPNKNED 516
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/105 (20%), Positives = 41/105 (39%)
Frame = +3
Query: 255 ALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPAGAAHHDD 434
A+ ++ GD SV+ M ++H YYY F++ + + + G H +
Sbjct: 418 AMDKMLGDYHFTCSVNEMALAHTKHGG-DTYYYYFTHRASQQTWPEW-----MGVLHGYE 471
Query: 435 TIYVLTQSYQFPTIQTDSPDSHVVDEMTAIWYNFARHGDPNNCGD 569
++ + + + + W NFA+ GDPN D
Sbjct: 472 INFIFGEPLNQKRFNYTDEERELSNRFMRYWANFAKTGDPNKNED 516
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -3
Query: 640 SPHVPGTAAWRGRTPATGTPISGVSPQLFGSPCLAKLYQMAVISSTTWESGL----SVCM 473
SP + GT + G T + T G + G+ A + VI+ T +G S C+
Sbjct: 1106 SPAIMGTCSGTGNTCSALTRPVGETVTYDGTTSFATTFNSGVIARVTCSNGTQIGQSTCL 1165
Query: 472 VGNW 461
VG W
Sbjct: 1166 VGQW 1169
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +3
Query: 237 DERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPAG 416
+ER + R GD S+ L+S + VY Y F+Y + + + K G
Sbjct: 434 EERYRDGVARFLGDLFFTCSLIDFADLISDNIFGNVYMYYFTYRSSANPW-----PKWMG 488
Query: 417 AAHHDDTIYVLTQSYQFPTI--QTDSPDSHVVDE-MTAIWYNFARHG 548
H + Y Q Y P + QT D + + IW NFA G
Sbjct: 489 VMHGYEIEYAFGQPYWRPHLYDQTHLEDEKRLSSIIMQIWANFANTG 535
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +3
Query: 237 DERSTRALGRLYGDSIIGFSVHRMVKLMSRHSEYPVYYYVFSYIGNNSYYVDPGTGKPAG 416
+ER + R GD S+ L+S + VY Y F+Y + + + K G
Sbjct: 434 EERYRDGVARFLGDLFFTCSLIDFADLISDNIFGNVYMYYFTYRSSANPW-----PKWMG 488
Query: 417 AAHHDDTIYVLTQSYQFPTI--QTDSPDSHVVDE-MTAIWYNFARHG 548
H + Y Q Y P + QT D + + IW NFA G
Sbjct: 489 VMHGYEIEYAFGQPYWRPHLYDQTHLEDEKRLSSIIMQIWANFANTG 535
>AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical
protein T28C12.4b protein.
Length = 578
Score = 28.7 bits (61), Expect = 4.7
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 162 LPQENRTAA--VRELRAQYLGDGP-LRNDERSTRALG-RLYGDSIIGFSVHRMVKLMSRH 329
L ++NR + + + + GD P LR D ++ + +L D + +R ++ +
Sbjct: 362 LSRKNRLSRSKIEAMTEKVYGDSPALRADSKARKMFFVQLISDIFANYGNYRFMRDCQQR 421
Query: 330 SEYPVYYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVD 509
Y Y F + + G H + Y+ +Y + + D VV
Sbjct: 422 G-VECYGYSFDHQSKQMWGWLQHVVPFTGGTHTSELSYLFDCNYMSAPLGMNKTDK-VVS 479
Query: 510 EMTAIWY-NFARHGDPN 557
MTA ++ NF + G PN
Sbjct: 480 GMTADYFTNFVKFGTPN 496
>AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical
protein T28C12.4a protein.
Length = 658
Score = 28.7 bits (61), Expect = 4.7
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 162 LPQENRTAA--VRELRAQYLGDGP-LRNDERSTRALG-RLYGDSIIGFSVHRMVKLMSRH 329
L ++NR + + + + GD P LR D ++ + +L D + +R ++ +
Sbjct: 442 LSRKNRLSRSKIEAMTEKVYGDSPALRADSKARKMFFVQLISDIFANYGNYRFMRDCQQR 501
Query: 330 SEYPVYYYVFSYIGNNSYYVDPGTGKPAGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVD 509
Y Y F + + G H + Y+ +Y + + D VV
Sbjct: 502 G-VECYGYSFDHQSKQMWGWLQHVVPFTGGTHTSELSYLFDCNYMSAPLGMNKTDK-VVS 559
Query: 510 EMTAIWY-NFARHGDPN 557
MTA ++ NF + G PN
Sbjct: 560 GMTADYFTNFVKFGTPN 576
>Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical
protein DY3.2 protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 411 AGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDE----MTAIWYNFARHGDPNNCGD 569
AGA HH +YV+ + Q+P D+P + + D +++I F+ DP++ D
Sbjct: 508 AGAVHHPPEVYVM-KKQQWPI--GDNPSARLEDSEGDTVSSITVEFSESSDPSDPAD 561
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 486 CPSVWWGTGTTE*VRRWCRRGEQLQLVSRCQDPRNSCYCRCS 361
CPS WWGT RR C + ++C +C C+ S
Sbjct: 1797 CPSGWWGTFPR--CRR-CSCAQTKDYEAQCDKKTGACQCKKS 1835
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 486 CPSVWWGTGTTE*VRRWCRRGEQLQLVSRCQDPRNSCYCRCS 361
CPS WWGT RR C + ++C +C C+ S
Sbjct: 1797 CPSGWWGTFPR--CRR-CSCAQTKDYEAQCDKKTGACQCKKS 1835
>Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical
protein F13H10.5 protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 75 WKAPPVLQNETLLDELNNDWENIAPIYFSLPQENRTAAV 191
WK QN T + + DW +I PIY S + + + A+
Sbjct: 95 WKDNLKFQNFTADSDFSRDWWSIDPIYISALRSSASVAM 133
>X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 411 AGAAHHDDTIYVLTQSYQFPTIQTDSPDSHVVDE----MTAIWYNFARHGDPNNCGD 569
AGA HH +YV+ + Q+P D+P + + D +++I F+ DP++ D
Sbjct: 508 AGAVHHPPEVYVM-KKQQWPI--GDNPSARLEDSEGDTVSSITVEFSESSDPSDPAD 561
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 486 CPSVWWGTGTTE*VRRWCRRGEQLQLVSRCQDPRNSCYCRCS 361
CPS WWGT RR C + ++C +C C+ S
Sbjct: 1816 CPSGWWGTFPR--CRR-CSCAQTKDYEAQCDKKTGACQCKKS 1854
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 395 WHRETSWS---CSP-RRHHLRTHSVVPVPHHTDGQPRLPRR*RDDCHLV 529
W R TSW P RRHH V D RLPR+ R CH V
Sbjct: 526 WPRRTSWIRHLVPPDRRHHTDEEHKVREVEQLD---RLPRQHRPHCHTV 571
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 395 WHRETSWS---CSP-RRHHLRTHSVVPVPHHTDGQPRLPRR*RDDCHLV 529
W R TSW P RRHH V D RLPR+ R CH V
Sbjct: 526 WPRRTSWIRHLVPPDRRHHTDEEHKVREVEQLD---RLPRQHRPHCHTV 571
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,191,783
Number of Sequences: 27780
Number of extensions: 372446
Number of successful extensions: 1329
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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