Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0716
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   184   8e-49
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   5.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.2  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   6.9  
AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.1  
AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.1  
AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.1  
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    22   9.1  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    22   9.1  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  184 bits (449), Expect = 8e-49
 Identities = 85/100 (85%), Positives = 92/100 (92%)
 Frame = +1

Query: 37  RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 216
           RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+DASVY  + LPKLYAKLHYC
Sbjct: 14  RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYC 73

Query: 217 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 336
           VSCAIHSKVVRNRSK+ RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 74  VSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113



 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 3  KRRNGGRAKH 32
          +RRNGGR KH
Sbjct: 3  ERRNGGRCKH 12


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 234 QQSCQEQIEERQKNPYSSQ 290
           QQ  Q+Q ++RQ+ P S Q
Sbjct: 254 QQLSQQQQQQRQRQPSSQQ 272


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 16/75 (21%), Positives = 32/75 (42%)
 Frame = +1

Query: 70   CARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVR 249
            CA  V K + + ++ IR  + +    DI  ASV+   +         Y +   +   +  
Sbjct: 808  CATTVRKGRKLYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIRMELICPIPE 867

Query: 250  NRSKKDRRIRTPPKS 294
             ++ + R+I  P +S
Sbjct: 868  EQNTRGRKIYAPEES 882


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 266 TEESVLLPRVTSLGTCHVHRQ 328
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


>AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 177 HWVYRGIVNISDRRRFYDVPNH 112
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 177 HWVYRGIVNISDRRRFYDVPNH 112
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 177 HWVYRGIVNISDRRRFYDVPNH 112
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 64  TNCARCVPKDKAIKKFVIRNIVE 132
           T+CA+C  K K+  + VI  +++
Sbjct: 70  TDCAKCSEKQKSGTEKVINYLID 92


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 64  TNCARCVPKDKAIKKFVIRNIVE 132
           T+CA+C  K K+  + VI  +++
Sbjct: 70  TDCAKCSEKQKSGTEKVINYLID 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,683
Number of Sequences: 2352
Number of extensions: 6793
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)