Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0712
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.4  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 212 SCINRCVSLIILRGRAAILNMRSSAVCQMEA 120
           +CI RC S I + G + I  M  S +C  E+
Sbjct: 64  ACIGRCASYIQVSG-SKIWQMERSCMCCQES 93


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 114 SYNCIKYLIILALNVLTTLVEARFLILMN 28
           S NC ++LI+LAL+         F IL N
Sbjct: 262 STNCPRFLIMLALSYTVIQEVMLFTILWN 290


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +1

Query: 442 WSPALQIRTVLLSIQALLSAPNPDDP 519
           WSPA          +   +AP P DP
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDP 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,151
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)