Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0712
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 220 6e-58
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 220 6e-58
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 174 5e-44
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 154 5e-38
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 135 3e-32
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 133 9e-32
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 133 1e-31
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 132 2e-31
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 132 2e-31
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 131 4e-31
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 131 4e-31
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 130 7e-31
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 130 7e-31
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 129 2e-30
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 129 2e-30
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 129 2e-30
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 126 2e-29
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 116 1e-26
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 112 2e-25
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 110 7e-25
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 109 1e-24
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 109 1e-24
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 109 1e-24
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 106 2e-23
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 103 1e-22
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 97 7e-21
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 95 3e-20
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 95 4e-20
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 86 2e-17
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 83 1e-16
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 82 3e-16
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 81 9e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 78 5e-15
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 78 6e-15
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 77 1e-14
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 75 6e-14
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 73 1e-13
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 63 2e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 62 3e-10
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 62 3e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 56 2e-08
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 56 2e-08
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 45 4e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 33 0.18
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 32 0.42
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 220 bits (538), Expect = 6e-58
Identities = 102/145 (70%), Positives = 116/145 (80%)
Frame = +1
Query: 169 LPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYP 348
LPRRIIKETQRL+ EP PGISA PSE N RYF+V++ GP S +YP
Sbjct: 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 65
Query: 349 MSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 528
M+APKVRF+TKIYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+
Sbjct: 66 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSE 125
Query: 529 DVAELWKVNESEAIXNAKEWTRRYA 603
++A+ WK NE+EA+ AKEWTR YA
Sbjct: 126 NIAKHWKSNEAEAVDTAKEWTRLYA 150
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 220 bits (538), Expect = 6e-58
Identities = 102/145 (70%), Positives = 116/145 (80%)
Frame = +1
Query: 169 LPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYP 348
LPRRIIKETQRL+ EP PGISA PSE N RYF+V++ GP S +YP
Sbjct: 6 LPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 65
Query: 349 MSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 528
M+APKVRF+TKIYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+
Sbjct: 66 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSE 125
Query: 529 DVAELWKVNESEAIXNAKEWTRRYA 603
++A+ WK NE+EA+ AKEWTR YA
Sbjct: 126 NIAKHWKSNEAEAVETAKEWTRLYA 150
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 174 bits (423), Expect = 5e-44
Identities = 79/116 (68%), Positives = 92/116 (79%)
Frame = +1
Query: 256 RYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDILK 435
RYF+V++ GP S +YPM+APKVRF+TKIYHPNID+LGRICLDILK
Sbjct: 2 RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK 61
Query: 436 DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRYA 603
DKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WK NE+EA+ AKEWTR YA
Sbjct: 62 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 154 bits (374), Expect = 5e-38
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +1
Query: 169 LPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYP 348
LPRRIIKETQRL+ EP PGISA PSE N RYF+V++ GP S +YP
Sbjct: 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 65
Query: 349 MSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLL 477
M+APKVRF+TKIYHPNID+LGRICLDILKDKWSPALQIRTVLL
Sbjct: 66 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 108
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 135 bits (326), Expect = 3e-32
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Frame = +1
Query: 142 LDR-IFKMAALPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXX 318
LDR I +MA+ +RI+KE + L ++P SA P + ++ + GP DS
Sbjct: 24 LDRGILEMAS--KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFL 81
Query: 319 XXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLS 498
DYP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+
Sbjct: 82 VTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 141
Query: 499 APNPDDPLANDVAELWKVNESEAIXNAKEWTRRYAM 606
PNPDDPL ++A ++K ++++ A+ WT++YAM
Sbjct: 142 DPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAM 177
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 133 bits (322), Expect = 9e-32
Identities = 63/144 (43%), Positives = 88/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK+YHPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + S+ A+ WT++YAM
Sbjct: 124 AHMYKTDRSKYESTARSWTQKYAM 147
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 133 bits (321), Expect = 1e-31
Identities = 62/144 (43%), Positives = 90/144 (62%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
RRI+KE + L ++P SA P+ + ++ + GP +S DYP
Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILKD+WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K ++++ A+ WT++YA+
Sbjct: 124 AHIYKTDKTKYEAMARSWTQKYAL 147
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 132 bits (320), Expect = 2e-31
Identities = 62/144 (43%), Positives = 89/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K ++++ A+ WT++YAM
Sbjct: 124 AHMYKTDKNKYESTARTWTQKYAM 147
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 132 bits (319), Expect = 2e-31
Identities = 61/144 (42%), Positives = 88/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + ++ A+ WT++YAM
Sbjct: 124 AHMYKTDRAKYESTARSWTQKYAM 147
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 131 bits (317), Expect = 4e-31
Identities = 61/144 (42%), Positives = 89/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K ++++ A+ WT++YAM
Sbjct: 124 AHMYKTDKNKYESTARSWTQKYAM 147
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 131 bits (317), Expect = 4e-31
Identities = 61/144 (42%), Positives = 89/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K ++++ A+ WT++YAM
Sbjct: 124 AHMYKTDKNKYESTARSWTQKYAM 147
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 130 bits (315), Expect = 7e-31
Identities = 61/144 (42%), Positives = 88/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + ++ A+ WT++YAM
Sbjct: 124 AHMYKTDRAKYEATARNWTQKYAM 147
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 130 bits (315), Expect = 7e-31
Identities = 61/144 (42%), Positives = 88/144 (61%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + ++ A+ WT++YAM
Sbjct: 124 AHMYKTDRAKYEATARNWTQKYAM 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 129 bits (311), Expect = 2e-30
Identities = 62/144 (43%), Positives = 86/144 (59%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI KE + L ++P SA P+ + + + GP DS DYP
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK+YHPNI+ G ICLDILK++WSPAL + VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + + A+ WT++YAM
Sbjct: 124 AHIYKTDRVKYESTAQSWTQKYAM 147
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 129 bits (311), Expect = 2e-30
Identities = 62/144 (43%), Positives = 86/144 (59%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI KE + L ++P SA P+ + + + GP DS DYP
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV F TK+YHPNI+ G ICLDILK++WSPAL + VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEI 123
Query: 535 AELWKVNESEAIXNAKEWTRRYAM 606
A ++K + + A+ WT++YAM
Sbjct: 124 AHIYKTDRVKYESTAQSWTQKYAM 147
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 129 bits (311), Expect = 2e-30
Identities = 63/145 (43%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVP-SETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPM 351
+RI +E + + + P SA P +E + ++ + GP DS DYP
Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 352 SAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 531
PKV F TK+YHPNID G ICLDILK++WSPA VLLSI +LL+ PNP+DPL +
Sbjct: 64 KPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPE 123
Query: 532 VAELWKVNESEAIXNAKEWTRRYAM 606
+A L+KV++S+ A++WT++YAM
Sbjct: 124 IAHLYKVDKSKYESTAQKWTQKYAM 148
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 126 bits (303), Expect = 2e-29
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPG-ISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPM 351
+RI+KE + L ++P I A P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 63
Query: 352 SAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 531
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL +
Sbjct: 64 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 123
Query: 532 VAELWKVNESEAIXNAKEWTRRYAM 606
+A ++K + ++ A+ WT++YAM
Sbjct: 124 IAHMYKTDRAKYEATARNWTQKYAM 148
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 116 bits (280), Expect = 1e-26
Identities = 57/128 (44%), Positives = 72/128 (56%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R+ E LM PGISA P E N + +TG +D+ DYP
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
+PKV+F T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL N
Sbjct: 99 SPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQA 158
Query: 535 AELWKVNE 558
A+LW E
Sbjct: 159 AQLWSNQE 166
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 112 bits (270), Expect = 2e-25
Identities = 56/128 (43%), Positives = 70/128 (54%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R+ E LM PGISA P E N + +TG +D+ DYP
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PKV+F T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
Query: 535 AELWKVNE 558
A+LW E
Sbjct: 158 AQLWSNQE 165
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 110 bits (265), Expect = 7e-25
Identities = 50/130 (38%), Positives = 77/130 (59%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R++ + +RL ++P GIS P + N +++ ++ GPED+ DYP
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
P VRF+++++HPNI G ICLDIL+++WSP + VL SIQ+LL PNPD P +
Sbjct: 67 PPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEA 126
Query: 535 AELWKVNESE 564
A L+ N+ E
Sbjct: 127 ARLFSENKRE 136
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 109 bits (263), Expect = 1e-24
Identities = 47/137 (34%), Positives = 80/137 (58%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R++++ +RL Q+P GIS P + N ++ ++ GP+D+ DYP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 535 AELWKVNESEAIXNAKE 585
A ++ ++ E +E
Sbjct: 127 ARMFSESKREYNRRVRE 143
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 109 bits (263), Expect = 1e-24
Identities = 46/130 (35%), Positives = 78/130 (60%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R++++ +RL Q+P GIS P + N ++ ++ GP+D+ DYP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 535 AELWKVNESE 564
A ++ ++ E
Sbjct: 127 ARMYSESKRE 136
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 109 bits (263), Expect = 1e-24
Identities = 46/130 (35%), Positives = 78/130 (60%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+R++++ +RL Q+P GIS P + N ++ ++ GP+D+ DYP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 535 AELWKVNESE 564
A ++ ++ E
Sbjct: 127 ARMYSESKRE 136
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 106 bits (254), Expect = 2e-23
Identities = 50/121 (41%), Positives = 69/121 (57%)
Frame = +1
Query: 241 SETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRIC 420
+ N + ++ GP+ + DYP PK F T IYHPNI+ G IC
Sbjct: 32 NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSIC 91
Query: 421 LDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRY 600
++ILKDKW+PAL + VLLSI LL PNPDDPL ++ +L+K N + A+E+T R+
Sbjct: 92 MNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARH 151
Query: 601 A 603
A
Sbjct: 152 A 152
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 103 bits (247), Expect = 1e-22
Identities = 58/144 (40%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Frame = +1
Query: 178 RIIKETQRLMQ-EPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
RI KE Q + + GI P N + GP + YP
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 355 APKVRFITKIYHPNID-RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAND 531
PK++F TK++HPNI + G ICLDILKD+WSPAL ++T L+SIQALLSAP P DP
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 532 VAELWKVNESEAIXNAKEWTRRYA 603
VAE + N + A+ WT +A
Sbjct: 126 VAEQYMKNYQVFVSTARYWTETFA 149
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 97.5 bits (232), Expect = 7e-21
Identities = 63/160 (39%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Frame = +1
Query: 163 AALPRRIIKETQRLMQEPVPGIS------AVPSETNARYFHVI---VTGPEDSXXXXXXX 315
A L R+ KE + L+ +P G S A + F I + GPED+
Sbjct: 5 ARLSLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIF 64
Query: 316 XXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDIL----KDKWSPALQIRTVLLSI 483
YP P V F T IYHPNID GRICLDIL K W P+L I TVL S+
Sbjct: 65 NLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSM 124
Query: 484 QALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRYA 603
+ LLS PNPDD L +V+ +K N A+E T +YA
Sbjct: 125 RLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 95.5 bits (227), Expect = 3e-20
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Frame = +1
Query: 160 MAALPRRIIKETQRLMQEPV--PGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXX 333
M A R+ KE + + +E V P I + +TN + ++ GP ++
Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
Query: 334 XXDYPMSAPKVRFITKIYHPNID-RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 510
YP+ P+VRF+TKI+HPN+ + G ICLDILK+ WSPA +++V +I AL++ P P
Sbjct: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 511 DDPLANDVAELWKVNESEAIXN-AKEWTRRYAM 606
D PL D L + + + A+ +TR AM
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 95.1 bits (226), Expect = 4e-20
Identities = 50/148 (33%), Positives = 75/148 (50%)
Frame = +1
Query: 160 MAALPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXX 339
++A +RI +E L +P P SA P N ++ + GP +
Sbjct: 34 VSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPS 93
Query: 340 DYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 519
DYP PK+ F T+IYH N+D G + ++IL+D WSPAL I VL +I+++ P P P
Sbjct: 94 DYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
Query: 520 LANDVAELWKVNESEAIXNAKEWTRRYA 603
+A L+ + + AKEWT R+A
Sbjct: 154 ALPVIARLYLTDREKHDEVAKEWTLRFA 181
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 85.8 bits (203), Expect = 2e-17
Identities = 42/104 (40%), Positives = 57/104 (54%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI+KE + L ++P SA P + ++ + GP +S DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQ 486
PKV F TK++HPNI+ G ICLDILK++WSPAL I V L Q
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIFQ 107
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = +1
Query: 229 SAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL 408
S +PS N + V GP YP PK+ F TKI+HPNI +
Sbjct: 51 SWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEI 110
Query: 409 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL--ANDVAELWKVNESEAIXNAK 582
G I +DIL +WS AL I VLLSI ++LS NP +PL +N A L++ + A+
Sbjct: 111 GEIFVDILGSRWSSALTINLVLLSICSILS--NPVEPLLVSNHAARLYQKDRKAYEKVAR 168
Query: 583 EWTRRYA 603
EWT +YA
Sbjct: 169 EWTLKYA 175
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +1
Query: 262 FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL-GRICLDILKD 438
F+V GP+DS YP +P V FITKIYHPN+D L G +CLD++
Sbjct: 32 FYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ 91
Query: 439 KWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRYA 603
WSP + V + + LL PNP DPL + A L + KE+ +YA
Sbjct: 92 TWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 80.6 bits (190), Expect = 9e-16
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +1
Query: 262 FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL-GRICLDILKD 438
F V +GP+DS YP +P V FITKIYHPN+D + G +CLD++
Sbjct: 32 FFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ 91
Query: 439 KWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRYA 603
WSP + V + + LL PNP DPL + A L + KE+ +YA
Sbjct: 92 TWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 78.2 bits (184), Expect = 5e-15
Identities = 42/143 (29%), Positives = 70/143 (48%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+++ KE + L + P GI V ++ + + GP + D+P S
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 355 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 534
PK F+TKI+HPN+ G IC++ LK W+P+L +R VL ++ LL P P+ L
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 535 AELWKVNESEAIXNAKEWTRRYA 603
++ N E +A+ +T +A
Sbjct: 133 GKMLLENYDEYARHARLYTGIHA 155
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 343 YPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 522
YP APKV+ TK+YHPNID G +CL+IL++ W P L I TV+ + L + PN +DPL
Sbjct: 89 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPL 148
Query: 523 ANDVAELWKVN 555
++ A + + N
Sbjct: 149 NHEAAAVLRDN 159
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +1
Query: 262 FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDR-LGRICLDILKD 438
F+V GP DS YP +P V F+ KIYHPN+D G +CLD++
Sbjct: 32 FYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ 91
Query: 439 KWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRYA 603
WSP + V S + LL PNP DP + A L + + KE+ +YA
Sbjct: 92 TWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 74.5 bits (175), Expect = 6e-14
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Frame = +1
Query: 187 KETQRLMQEPVPGISA-VPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPK 363
K+ + L ++PV G SA + E N + V + GP D+ +YP+S P
Sbjct: 12 KQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPT 71
Query: 364 VRFITKIYHPNIDRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 504
V F ++++HPN+ G++C+ IL ++W+P + +++LSI ++LS P
Sbjct: 72 VTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGP 131
Query: 505 NPDDPLANDVAELWKVNESEAIXNAKEWTRR 597
N + P + A+ W+ N +E RR
Sbjct: 132 NDESPANVEAAKEWRDNRAEFRKKVSRCVRR 162
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Frame = +1
Query: 187 KETQRLMQEPVPGISA-VPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPK 363
K+ + L + PV G SA + E N + V + GP D+ +YP S P
Sbjct: 11 KQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPT 70
Query: 364 VRFITKIYHPNIDRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 504
VRF + I+HPN+ GR+C+ IL ++W+P + +++LSI ++LS P
Sbjct: 71 VRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 130
Query: 505 NPDDPLANDVAELWKVNESE 564
N + P + A+ W+ E
Sbjct: 131 NDESPANVEAAKEWREKRDE 150
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +1
Query: 250 NARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDI 429
N +H + G + DYP PK +F +HPN+ G +CL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 430 LKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIXNAKEWTRRY 600
L + W PA+ ++ +L+ IQ LL PNP DP D L+ + E K +++Y
Sbjct: 98 LNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 RIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSA 357
R+ KE P G ++ N + + + VTG + YPM A
Sbjct: 19 RLQKELSEWQLNPPTGFRHKVTD-NLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEA 77
Query: 358 PKVRFITKI-YHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALL-SAPNPDDPLAND 531
P+V F++ HP+I G ICLDIL D WSPA+ + +V +SI ++L S+P P ND
Sbjct: 78 PQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADND 137
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 RIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSA 357
R+ KE P G ++ N + + + VTG + YPM A
Sbjct: 19 RLQKELSEWQVNPPTGFKHRVTD-NLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEA 77
Query: 358 PKVRFITKI-YHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALL-SAPNPDDPLAND 531
P+V F+ HP+I G ICLDIL D WSPA+ + +V +SI ++L S+P P ND
Sbjct: 78 PQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDND 137
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Frame = +1
Query: 268 VIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDIL----- 432
V + GP D+ +YP S P VRF + ++HPN+ GR+C+ IL
Sbjct: 71 VTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGD 130
Query: 433 --------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE 564
++W+P + +++LSI ++LS PN + P + A+ W+ E
Sbjct: 131 DPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDE 182
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +1
Query: 343 YPMSAPKVRFITKI-YHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN-PDD 516
YPM AP+V F HP+I G ICLD+L D WSPA+++ ++ LSI ++LS+ +
Sbjct: 73 YPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQK 132
Query: 517 PLAND 531
P ND
Sbjct: 133 PKDND 137
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 343 YPMSAPKVRFITKI-YHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD- 516
YPM +P+V F+ HP+I G ICLDIL D WSPA+ + ++ +SI ++LS+
Sbjct: 73 YPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTEKQR 132
Query: 517 PLAND 531
P ND
Sbjct: 133 PTDND 137
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = +1
Query: 175 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 354
+RI++E + + P ++P E N + + GP D+ DYP
Sbjct: 14 KRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFK 73
Query: 355 APKVRFITKIYHPNIDRLGRICLDILK---DKWSPALQIRTVLLSIQALL-SAPN 507
P +T + + +ICL I + W P+ +RT L+++ A + ++PN
Sbjct: 74 PPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 33.1 bits (72), Expect = 0.18
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Frame = +1
Query: 157 KMAALPRRIIKETQR---LMQEPVPGISAVPS-ETNARYFHVIVTGPEDSXXXXXXXXXX 324
K P+ +K+ Q+ ++ + +P V + E+ ++ G E +
Sbjct: 598 KFKGRPKNWVKDIQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFD 657
Query: 325 XXXXXDYPMSAPKVRFITK--IYHPNIDRLGRICLDIL-------KDKWSP-ALQIRTVL 474
YP PKV + + +PN+ + G++CL ++ ++KW P + +L
Sbjct: 658 IQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLL 717
Query: 475 LSIQALLSAPNP 510
+SIQAL+ P
Sbjct: 718 VSIQALILNEKP 729
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Frame = +1
Query: 199 RLMQEPVP-GISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFI 375
++++ +P IS E+ ++ G E + YP P V +
Sbjct: 281 KILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYH 340
Query: 376 TK--IYHPNIDRLGRICLDIL-------KDKWSP-ALQIRTVLLSIQALLSAPNP 510
+ +PN+ G++CL +L ++KW P + +L+SIQAL+ P
Sbjct: 341 SGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKP 395
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Frame = +1
Query: 184 IKETQRLMQEPVPGISAVPS-ETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAP 360
I++ R++++ +P + V + E+ ++ G + + YP + P
Sbjct: 337 IQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPP 396
Query: 361 KVRFITK--IYHPNIDRLGRICLDIL-------KDKWSP-ALQIRTVLLSIQALLSAPNP 510
V + + +PN+ G++CL +L ++KW P + VL+SIQ L+ P
Sbjct: 397 IVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKP 456
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,983,193
Number of Sequences: 28952
Number of extensions: 266318
Number of successful extensions: 773
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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