Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0710
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9K8J1 Cluster: Protease; n=1; Bacillus halodurans|Rep:...    40   0.078
UniRef50_Q7UZC5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A7AR16 Cluster: GCC2 and GCC3 domain containing protein...    33   6.7  

>UniRef50_Q9K8J1 Cluster: Protease; n=1; Bacillus halodurans|Rep:
           Protease - Bacillus halodurans
          Length = 289

 Score = 39.5 bits (88), Expect = 0.078
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +2

Query: 428 VFFSYHENVWIFFHFLI*NSFLENKTKHIFFILLIQSMFNIPLNKTAKINL 580
           + + +H N+W+   FLI N++LE K  H  FI  +   F I L++  K +L
Sbjct: 176 ILYPFHLNLWLVLTFLIVNNYLEYKQCHYRFIRFLTERFYIGLSQQGKPHL 226


>UniRef50_Q7UZC5 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 275

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 197 EAIS*IAVSGQTITRHPDPRNLW*HSPVLYCS 102
           + IS +AV G   +R  +  N W H P++YCS
Sbjct: 184 DVISPVAVVGHIASRETNTANTWGHEPIVYCS 215


>UniRef50_A7AR16 Cluster: GCC2 and GCC3 domain containing protein;
            n=1; Babesia bovis|Rep: GCC2 and GCC3 domain containing
            protein - Babesia bovis
          Length = 2953

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +3

Query: 18   RTLPCPPTCRAVGSYLQTLLQDSCGAWT*AIEDG*MLPKISRVRMSGDCLPRHS 179
            R LPCPP     G    +  Q  C     A     M+ ++SR RM    LPR S
Sbjct: 1777 RCLPCPPMMTTTGRGAVSASQCVCNVGYFATTSNTMMRQLSRARMLPPVLPRRS 1830


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,224,787
Number of Sequences: 1657284
Number of extensions: 11483956
Number of successful extensions: 25294
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25286
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)