Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0710
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 453 TFSWYEKKTKVRVTELIINFKVY 385
           TFSWY K  KV  +++II+  ++
Sbjct: 223 TFSWYSK--KVFYSKIIISGSIF 243


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 139 EIFGNIHPSSIAHVQAPHESCNSVWR 62
           E+ G++ P        PHE C+  +R
Sbjct: 468 EVDGSVAPKECKQDFMPHELCDKYYR 493


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 386 YTLKLMINSVTRTLVFFSYHENVWIFFH-FLI 478
           +T+K ++ +   T    ++   VW FF+ FLI
Sbjct: 389 HTVKTVLKTTMSTFSDITFMRTVWKFFNIFLI 420


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 478 YQKMKKNPDILVV*KKNQSASYGINH 401
           YQ  K NP +     KNQ+  +   H
Sbjct: 16  YQNYKTNPFLASDCDKNQNTEHNYTH 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,114
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)