Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0707
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.              31   1.0  
AK128570-1|BAC87504.1|  851|Homo sapiens protein ( Homo sapiens ...    31   1.0  
AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette tr...    31   1.0  

>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
          Length = 5058

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 216  LLILNCKFKFLNKNILCVLLKTIMGMGYLFV 124
            LL+L+ +  F+N+  LC+L  T  G G  F+
Sbjct: 3696 LLVLHNQLSFVNQTFLCLLSTTAFGQGVFFI 3726


>AK128570-1|BAC87504.1|  851|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46729 fis, clone TRACH3019370, weakly  similar
           to ATP-binding cassette, sub-family A, member 1. ).
          Length = 851

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 216 LLILNCKFKFLNKNILCVLLKTIMGMGYLFV 124
           LL+L+ +  F+N+  LC+L  T  G G  F+
Sbjct: 451 LLVLHNQLSFVNQTFLCLLSTTAFGQGVFFI 481


>AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette
           transporter A13 protein.
          Length = 2127

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 216 LLILNCKFKFLNKNILCVLLKTIMGMGYLFV 124
           LL+L+ +  F+N+  LC+L  T  G G  F+
Sbjct: 764 LLVLHNQLSFVNQTFLCLLSTTAFGQGVFFI 794


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,624,615
Number of Sequences: 237096
Number of extensions: 679801
Number of successful extensions: 4846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4846
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)