Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0705
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 54 1e-07
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 54 1e-07
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 46 4e-05
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 41 0.001
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.006
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 33 0.22
U00040-3|AAM22033.1| 638|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z75956-4|CAN99718.1| 252|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75956-3|CAJ90494.1| 217|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 31 1.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 31 1.2
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.5
U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL032630-9|CAA21565.1| 369|Caenorhabditis elegans Hypothetical ... 30 2.0
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 29 3.5
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 4.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 4.7
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 4.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical pr... 28 8.1
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 8.1
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 8.1
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 71.3 bits (167), Expect = 7e-13
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Frame = +1
Query: 82 CGLVSGQEFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPS 261
C VSG+ C + G ++++ CS G A + CP LVF NP CD P
Sbjct: 171 CSQVSGEY--C-ESDGNISKSECSNVFFSCSEGIAHRRNCPANLVF---NPAISSCDWPK 224
Query: 262 NV-DCGDRKELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEE 438
NV DC ++ E KP + C +GYF + F C +GIP + CP GL F E+
Sbjct: 225 NVMDCSEKSE----KP-QNCGEVDGYFSFG--RCSSSFSACTNGIPIVMFCPDGLMFSEK 277
Query: 439 TSNCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMGPNGXXXXXXXXXXXXXXXXSSISAV 618
CD++ V+ +CD + +++ E + P + +
Sbjct: 278 NQMCDYEWNVD-ECDLESSGFMEN---YKASEALTP----CTNMDNGLYALDCTPRVLSC 329
Query: 619 TESNRKREAVHPGKVYNEDTFMCDDPEKVVGC 714
P V+NE++ +CD PE + C
Sbjct: 330 QNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Frame = +1
Query: 82 CGLVSGQEFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPS 261
C S + C + G++ + C+ G CPDGL+FS++N + CD
Sbjct: 229 CSEKSEKPQNCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKN---QMCDYEW 285
Query: 262 NVDCGDRKE---LQEPKPSKG---CPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGL 423
NVD D + ++ K S+ C + D + C +G N CPP L
Sbjct: 286 NVDECDLESSGFMENYKASEALTPCTNMDNGLYALD--CTPRVLSCQNGRENIFECPPSL 343
Query: 424 YFDEETSNCDWKEVVNRQC 480
F+E + CD+ E + C
Sbjct: 344 VFNENSLICDYPETSLKCC 362
Score = 34.7 bits (76), Expect = 0.071
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 256 PSNVDCGDRKELQEPKPSKG--CPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYF 429
P+N C + + E G C K + + F C++GI + CP L F
Sbjct: 157 PTNKKCSWKGMIDECSQVSGEYCESDGNISKS---ECSNVFFSCSEGIAHRRNCPANLVF 213
Query: 430 DEETSNCDWKEVV 468
+ S+CDW + V
Sbjct: 214 NPAISSCDWPKNV 226
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 379 CADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLD-DG 513
C G P L C L +D C WK +++ +C Q++ + + DG
Sbjct: 139 CNSGSPRFLSCSTPLIYDPTNKKCSWKGMID-ECSQVSGEYCESDG 183
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 358 ACD-KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVV 468
AC+ +F C G + CP L + + CDW+ V
Sbjct: 37 ACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNV 74
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Frame = +1
Query: 94 SGQ-EFKCPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV 267
SG+ E C K+ G +P+ + CS G A CP LVF NP CD P +V
Sbjct: 240 SGELEPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVF---NPTILVCDWPRDV 296
Query: 268 -DCGDRKELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETS 444
+C L P+P+ C ++GYF Q F C +G + CP GL F E T
Sbjct: 297 AECAG---LPTPQPT--C-EEDGYFSFG--QCSSSFTACTNGRAIVMFCPAGLKFSESTV 348
Query: 445 NCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMG 543
CD++ V+ +C + + + + GE G
Sbjct: 349 RCDYESNVS-ECQETSGEESGEASGEQSGEGSG 380
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 370 FHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMG 543
+ +C L CP L++D ++ C WK +V + +T + DG GE G
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLT---ITDGSGETSGEGSG 209
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVV 468
+F C+ GI + CP L ++E CDW+ V
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Frame = +1
Query: 94 SGQ-EFKCPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV 267
SG+ E C K+ G +P+ + CS G A CP LVF NP CD P +V
Sbjct: 240 SGELEPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVF---NPTILVCDWPRDV 296
Query: 268 -DCGDRKELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETS 444
+C L P+P+ C ++GYF Q F C +G + CP GL F E T
Sbjct: 297 AECAG---LPTPQPT--C-EEDGYFSFG--QCSSSFTACTNGRAIVMFCPAGLKFSESTV 348
Query: 445 NCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMG 543
CD++ V+ +C + + + + GE G
Sbjct: 349 RCDYESNVS-ECQETSGEESGEASGEQSGEGSG 380
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 370 FHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMG 543
+ +C L CP L++D ++ C WK +V + +T + DG GE G
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLT---ITDGSGETSGEGSG 209
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVV 468
+F C+ GI + CP L ++E CDW+ V
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 45.6 bits (103), Expect = 4e-05
Identities = 35/131 (26%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Frame = +1
Query: 112 CPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKE 288
C KS GFYP+ C L+ C + CP GL +S + ++C + C
Sbjct: 481 CSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYS---ASLKYCTTSTASGCSVTTT 537
Query: 289 LQEPKPSKGCPRQNGYFKHPD----------------PQACDKFHYCADGIPNELPCPPG 420
+K P + P P C KF C +GI CP G
Sbjct: 538 RAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNG 597
Query: 421 LYFDEETSNCD 453
L F +T CD
Sbjct: 598 LSFHADTMMCD 608
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 106 FKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVDC 273
FKC K GF+ P C + +C G + CP+GL F + + CD P C
Sbjct: 564 FKCT-KDGFFGVPSDCLKFIRCVNGISYNFECPNGLSF---HADTMMCDRPDPSKC 615
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Frame = +1
Query: 121 KSGFYPDPYQCDLYYKCSRGDA-EEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQE 297
+ G Y + C +C G+ E C L F N CD P V G Q
Sbjct: 1186 EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAF---NQLTGKCDYPQKVS-GCENHGQ- 1240
Query: 298 PKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDWKEVV 468
+ G ++G F D C+ F+ C G + CP G F+ S CDW V
Sbjct: 1241 ---TNGECSEHGSFI-ADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 109 KCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV 267
+C + F D C+++Y+C G CP G VF NP CD PS V
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVF---NPLLSVCDWPSAV 1293
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 103 EFKCPD-KSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVD 270
+F C + G Y D D++Y CS ++ CP G VF N N++ CD D
Sbjct: 190 DFDCNGLEDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVF---NINQQSCDFQCTTD 242
Score = 32.7 bits (71), Expect = 0.29
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 25/144 (17%)
Frame = +1
Query: 103 EFKCPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPN-KEHCD-------- 252
EF C K G Y + + C G A CPD LVF++ + +E CD
Sbjct: 96 EFDCTSKQDGIYSIGCS-NQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTT 154
Query: 253 IPSNVDCGDRK------ELQ---EPKPSKGCPRQ-----NGYFKHPDPQAC-DKFHYCAD 387
P + G+ E+ E +PS P NG C D F+ C++
Sbjct: 155 APQVYEDGEEGYGEASGEIAGDYERQPSNEQPDSIDFDCNGLEDGNYADGCNDVFYSCSN 214
Query: 388 GIPNELPCPPGLYFDEETSNCDWK 459
+ + CPPG F+ +CD++
Sbjct: 215 NMVFQRYCPPGTVFNINQQSCDFQ 238
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Frame = +1
Query: 160 YYKCSRGDAEEKLCPDGLVFSDE------NPNKEHCDIPSNVDCGDRKELQEPKPSKGCP 321
Y +CS G ++ + C + VFS++ + C +P N +K S C
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSACTVPKNPSI--KKYYTSNDQSAFCD 1183
Query: 322 -RQNGYFKHPDPQACDKFHYCADGIPNELP-CPPGLYFDEETSNCDWKEVVN 471
+++G ++ + + C C G E P C L F++ T CD+ + V+
Sbjct: 1184 GKEDGLYR--NERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVS 1233
Score = 31.1 bits (67), Expect = 0.87
Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Frame = +1
Query: 160 YYKCSRGDAEEKLCPDGLVFSDEN--PNKE--HCDIPSNVDCGDRKELQEPKPSKGCPRQ 327
Y C G + C D VF ++ P E C + N + D + SK Q
Sbjct: 48 YSICVNGVRQAATCSDDSVFYEDECVPVDESPECRVDENTEEDDTPYAEFDCTSK----Q 103
Query: 328 NGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLD 507
+G + ++F C G CP L F+E T +C CD++ +D
Sbjct: 104 DGIYSIG---CSNQFISCVAGGAYMAKCPDSLVFNERTQDC------RESCDEVKQDTTT 154
Query: 508 DGFTCPDGE 534
DGE
Sbjct: 155 APQVYEDGE 163
Score = 30.3 bits (65), Expect = 1.5
Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 18/206 (8%)
Frame = +1
Query: 160 YYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVDCGDR------KELQEPKPSKGCP 321
Y +C+ EKLC G +F D + N+ C +P + CG K++ P+ P
Sbjct: 1047 YLECTDAGNVEKLCRIGKLF-DSHSNR--C-VP-RIGCGKEAIRDAIKDMIATTPAPAQP 1101
Query: 322 RQ-NGYFKHPDPQA------CD-KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQ 477
+Q G H D +A C K+ C+ G C F + C +E V+
Sbjct: 1102 KQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVSA- 1160
Query: 478 CDQITKDVLDDGFTCPDGEVMGPNGXXXXXXXXXXXXXXXXSSISAVTESNRKREAVHPG 657
C + +T D SA+ + HP
Sbjct: 1161 CTVPKNPSIKKYYTSNDQSAF--------CDGKEDGLYRNERDCSAILQCFGGELFEHPS 1212
Query: 658 ----KVYNEDTFMCDDPEKVVGCENY 723
+N+ T CD P+KV GCEN+
Sbjct: 1213 CQSSLAFNQLTGKCDYPQKVSGCENH 1238
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVV 468
K+ C+D + C LYFDE + +C +++ V
Sbjct: 800 KYIQCSDSAASVRECEGSLYFDERSQSCRFRDEV 833
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 277 DRKELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDW 456
D K + PK CP +G + K+ C + + E CP GLYFD + C+
Sbjct: 31 DAKNVLNPK-GPPCPDGDGLYA---VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCE- 85
Query: 457 KEVVNRQC---DQITKDV 501
+ N C D++T +V
Sbjct: 86 RRSSNHLCATGDRVTLNV 103
Score = 35.1 bits (77), Expect = 0.054
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Frame = +1
Query: 112 CPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKEL 291
CPD G Y Y +C E+ CP+GL F E GDR L
Sbjct: 43 CPDGDGLYAVGCSSK-YLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 292 --QEPKPSKGC-PRQNGYFKHPDPQACDKFHY-CADGIPNELPCPPGLYFDEETSNCDW 456
++ S C R +G + D C++ +Y CA+GI CP + CD+
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDY 159
Score = 33.9 bits (74), Expect = 0.12
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Frame = +1
Query: 112 CPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV-DCGDRKE 288
C KS Y Y+ C + CP+ L FS E+ E C P + +C
Sbjct: 955 CFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKES---EKCVFPIDAKECSIATT 1011
Query: 289 LQEPK---PSKGCP-RQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDW 456
L PS C R NG H + C +G C L ++ +T C++
Sbjct: 1012 LDRTPPAVPSDFCTIRSNGL--HHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNY 1069
Query: 457 KEVVNRQC 480
K N+ C
Sbjct: 1070 KS-TNKDC 1076
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 133 YPDPYQCDLYY-KCSRGDAEEKLCPDGLVF-SDENPNKEHCDIPSNV-DC 273
+ D +C Y+ +CS G K CP+ L++ D+N CD P +V DC
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQN----LCDFPESVKDC 256
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 355 QACDK-FHYCADGIPNELPCPPGLYFDEETSNCDWKE 462
+AC K F C DG CP L F++ T CD+ E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 157 LYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV-DC 273
++Y C+ G CP L+F NP CD +NV DC
Sbjct: 590 VFYICANGQVVATTCPANLIF---NPYVGECDYSTNVRDC 626
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 361 CDKFHY-CADGIPNELPCPPGLYFDEETSNCDWKEVV 468
C+K+ C + + PCP GLY+ CD KE V
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENV 737
Score = 29.5 bits (63), Expect(2) = 0.006
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 154 DLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV-DCGDRKELQEPKPSKGCPRQN 330
D Y C+ + CP GL +S N CD +V DC + K P+ P
Sbjct: 802 DYYISCNNFETTINRCPAGLFYSKLN---NRCDYKEHVEDCPEYKPTPSTTPAAEQPGTT 858
Query: 331 GYFKHPDP 354
Y + P
Sbjct: 859 KYTTYNYP 866
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 361 CDKFHYCADGIPNELP-CPPGLYFDEETSNCDWKEVV 468
C+ ++ + + CP GL++ + + CD+KE V
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHV 836
Score = 27.9 bits (59), Expect(2) = 0.006
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 352 PQACDKFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVN 471
P + C G C PGL+++E+ C +K V+
Sbjct: 900 PYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVD 939
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 127 GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEH 246
G+ PD Y C +Y+C+ G ++ C +G ++ +H
Sbjct: 164 GYKPDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTCDH 203
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 346 PDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCD 453
PD C F+ CA G+ + C G +D+ CD
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTCD 202
>U00040-3|AAM22033.1| 638|Caenorhabditis elegans Hypothetical
protein C18H2.3 protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 176 EEMQKRSCVLMVSCSQMKTPTKNTVISLLTSTAATERSYKNLNHRRAALVKTDTLNILTH 355
E++ KR C +V + K NTV+ + A + Y H ++ K + LN LT
Sbjct: 492 EKLIKRDCEYLVEKVKYKNTVYNTVLQWSEAMAKSTMPYLYGAHVVISMKKCENLNKLTA 551
Query: 356 RPAINSTTALMVFP 397
I+ L FP
Sbjct: 552 LVTIHGCMMLAEFP 565
>Z75956-4|CAN99718.1| 252|Caenorhabditis elegans Hypothetical
protein R31.2d protein.
Length = 252
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 187 EEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQEPKPSKGCPRQNGYFKHPDP 354
E ++ P LV ++N +E DIP N D +++E + P P++ + Y K P P
Sbjct: 39 EREVSPKDLVV-EKNYGQEDIDIPKNDDHEEQEEPRAPTPAEDL---SHYVKEPSP 90
>Z75956-3|CAJ90494.1| 217|Caenorhabditis elegans Hypothetical
protein R31.2c protein.
Length = 217
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 187 EEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQEPKPSKGCPRQNGYFKHPDP 354
E ++ P LV ++N +E DIP N D +++E + P P++ + Y K P P
Sbjct: 4 EREVSPKDLVV-EKNYGQEDIDIPKNDDHEEQEEPRAPTPAEDL---SHYVKEPSP 55
>Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical
protein R31.2b protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 187 EEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQEPKPSKGCPRQNGYFKHPDP 354
E ++ P LV ++N +E DIP N D +++E + P P++ + Y K P P
Sbjct: 171 EREVSPKDLVV-EKNYGQEDIDIPKNDDHEEQEEPRAPTPAEDL---SHYVKEPSP 222
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 187 EEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQEPKPSKGCPRQNGYFKHPDP 354
E ++ P LV ++N +E DIP N D +++E + P P++ + Y K P P
Sbjct: 276 EREVSPKDLVV-EKNYGQEDIDIPKNDDHEEQEEPRAPTPAEDL---SHYVKEPSP 327
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/121 (26%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Frame = +1
Query: 103 EFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDE--------NPNKEHCDIP 258
+F+C DK+ + CD C+ G E C ++E P K CD
Sbjct: 186 QFRCADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANEFQCKNKRCQPRKFRCDYY 245
Query: 259 SNVDCGDRKELQE------PKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPG 420
DCGD + E P CP + CD CADG +E C
Sbjct: 246 D--DCGDNSDEDECGEYRCPPGKWNCPGTGHCI--DQLKLCDGSKDCADG-ADEQQCSQN 300
Query: 421 L 423
L
Sbjct: 301 L 301
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/121 (26%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Frame = +1
Query: 103 EFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDE--------NPNKEHCDIP 258
+F+C DK+ + CD C+ G E C ++E P K CD
Sbjct: 186 QFRCADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANEFQCKNKRCQPRKFRCDYY 245
Query: 259 SNVDCGDRKELQE------PKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPG 420
DCGD + E P CP + CD CADG +E C
Sbjct: 246 D--DCGDNSDEDECGEYRCPPGKWNCPGTGHCI--DQLKLCDGSKDCADG-ADEQQCSQN 300
Query: 421 L 423
L
Sbjct: 301 L 301
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDG---FTCPDGEV 537
+F C+ GI + CP L +D C++ V QC + +DV F C +G
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV-PQCGGVPQDVTSTQEAIFICENGLF 135
Query: 538 MGP 546
P
Sbjct: 136 FSP 138
>U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical
protein M03E7.4 protein.
Length = 191
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 94 SGQEFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCP 204
+G +F CP P +CD +Y CS + +E+ CP
Sbjct: 118 NGTDFHCPLSEQCVPMSSRCDGHYDCSM-EEDEQNCP 153
>AL032630-9|CAA21565.1| 369|Caenorhabditis elegans Hypothetical
protein Y62H9A.9 protein.
Length = 369
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 332 DTLNIL--THRPAINSTTALMVFPTSFRVLQDCTLTKRPPTATGKK*STGNAT 484
D N+L T+RP ++FP SFR CTL P A K G+ T
Sbjct: 144 DNFNLLVRTNRPTDIYKKKYLLFPVSFRAETYCTLVVNPHCAVVKLSERGDDT 196
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDGE 534
+F C+ GI + CP L +D C++ V QC + +DV P E
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV-PQCGGVPQDVTSTQEAYPSEE 131
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +1
Query: 112 CPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV-DCGDRK 285
C K+ GFY D Y CS G CP L F + + CD NV +C +
Sbjct: 214 CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEA---RVICDYVMNVPECTNGS 270
Query: 286 ELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPN 399
E + P +G + + ++ A+ +P+
Sbjct: 271 GNDEGSADETTPESSGEMPYSNGYGYEETTTVAEDVPS 308
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 367 KFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDGE 534
+F C+ GI + CP L +D C++ V QC + +DV P E
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNV-PQCGGVPQDVTSTQEAYPSEE 131
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +1
Query: 112 CPDKS-GFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNV-DCGDRK 285
C K+ GFY D Y CS G CP L F + + CD NV +C +
Sbjct: 214 CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEA---RVICDYVMNVPECTNGS 270
Query: 286 ELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPN 399
E + P +G + + ++ A+ +P+
Sbjct: 271 GNDEGSADETTPESSGEMPYSNGYGYEETTTVAEDVPS 308
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/106 (25%), Positives = 38/106 (35%)
Frame = +2
Query: 329 TDTLNILTHRPAINSTTALMVFPTSFRVLQDCTLTKRPPTATGKK*STGNATKSQKMFWM 508
T T + T +P+ +TT PTS T T P T ST T +
Sbjct: 587 TSTSSTTTQKPS-TTTTVPSTTPTSTTT----TTTTTPKPTTSTSTSTSTTTTTTTSTTA 641
Query: 509 MVSPVPTARSWAPTAVSLPHPTFPHPEDCPEVLYLP*RSPTAKGKL 646
+P PT + + V+L T+ P P PT K+
Sbjct: 642 TTTPQPTTTTTSEKPVTLTTQTWTAPPTTTVKRTTPQTVPTTTPKI 687
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/106 (25%), Positives = 38/106 (35%)
Frame = +2
Query: 329 TDTLNILTHRPAINSTTALMVFPTSFRVLQDCTLTKRPPTATGKK*STGNATKSQKMFWM 508
T T + T +P+ +TT PTS T T P T ST T +
Sbjct: 587 TSTSSTTTQKPS-TTTTVPSTTPTSTTT----TTTTTPKPTTSTSTSTSTTTTTTTSTTA 641
Query: 509 MVSPVPTARSWAPTAVSLPHPTFPHPEDCPEVLYLP*RSPTAKGKL 646
+P PT + + V+L T+ P P PT K+
Sbjct: 642 TTTPQPTTTTTSEKPVTLTTQTWTAPPTTTVKRTTPQTVPTTTPKI 687
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 28.7 bits (61), Expect = 4.7
Identities = 31/114 (27%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Frame = +1
Query: 94 SGQEFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKL--CPDGLVFSDENPNKEH--CDIPS 261
S +FKC P +CD C E C G +N K CD
Sbjct: 217 SKDQFKCSGSDACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP 276
Query: 262 NVDCGDRKELQEPKPSKGCPR---QNGYFKHPDPQACDKFHYCADGIPNELPCP 414
+ D G + + K G + ++G Q CD H C DGI E CP
Sbjct: 277 DCDDGSDEHQCDCKTCSGSEKALCEDGTCIMRS-QVCDGKHDCLDGIDEE-NCP 328
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
Frame = +2
Query: 230 TPTKNTVISLLTSTAATERSYKNLNHRRAALVKTDTLNILTHRPA----INSTTALMVFP 397
TPT T T+T T + A T T T P + +TT
Sbjct: 167 TPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTT 226
Query: 398 TSFRVLQDCTLTKRPPTATGKK*STGNATKSQKMFWMMVSPVPTARSWAPT 550
T+ T T P T T +T T + + PT + PT
Sbjct: 227 TTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPT 277
>Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical
protein R06B9.6 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 343 HPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQI 489
H D + + F Y A P EL G Y D+E+ +WKE+V +I
Sbjct: 116 HVDVEYSEHFKYVAHA-PLELEVRMG-YRDKESKKNEWKELVTSNVTRI 162
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 627 GLRYGRYRTSGQSSGWGKVGWGKETAVGAH 538
G R+G R GWG GWGK + A+
Sbjct: 709 GSRWGGGRGGWGGGGWGGGGWGKRSIRAAN 738
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 223 DENPNKEHCDIPSNVDCGDRKELQEPKP--SKGCPRQNGYFKHPDPQACDKFH 375
D+ PN CD+P+++ G +Q P P S PR+ + HP A + H
Sbjct: 247 DDIPNIVKCDLPADLVRGVHISMQPPSPAVSAFSPRR---YHHPTSVASHQSH 296
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 223 DENPNKEHCDIPSNVDCGDRKELQEPKP--SKGCPRQNGYFKHPDPQACDKFH 375
D+ PN CD+P+++ G +Q P P S PR+ + HP A + H
Sbjct: 247 DDIPNIVKCDLPADLVRGVHISMQPPSPAVSAFSPRR---YHHPTSVASHQSH 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.139 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,908
Number of Sequences: 27780
Number of extensions: 417422
Number of successful extensions: 1121
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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