Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0702
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 110 1e-24
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 39 0.004
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 39 0.004
Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical pr... 38 0.010
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 35 0.054
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 32 0.50
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 29 3.5
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 110 bits (264), Expect = 1e-24
Identities = 70/210 (33%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Frame = +3
Query: 132 LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 299
LK FV +C+ P +LH P+ FFKDYL+SLG +LP G +
Sbjct: 7 LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66
Query: 300 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 479
+D EGVI P++ + MGD A A
Sbjct: 67 ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125
Query: 480 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKLNCDSXXX 659
FS +D A+ +TAAI+ NP SA+L AKR V LKL +P A I DC A+ +N DS
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQG 185
Query: 660 XXXXXXXXXLLGKFEXSSHDLCESLKIDXD 749
LLGK+ + DL + K+D D
Sbjct: 186 YKFRGRANRLLGKWVEAKTDLATACKLDYD 215
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 110 bits (264), Expect = 1e-24
Identities = 70/210 (33%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Frame = +3
Query: 132 LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 299
LK FV +C+ P +LH P+ FFKDYL+SLG +LP G +
Sbjct: 7 LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66
Query: 300 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 479
+D EGVI P++ + MGD A A
Sbjct: 67 ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125
Query: 480 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKLNCDSXXX 659
FS +D A+ +TAAI+ NP SA+L AKR V LKL +P A I DC A+ +N DS
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQG 185
Query: 660 XXXXXXXXXLLGKFEXSSHDLCESLKIDXD 749
LLGK+ + DL + K+D D
Sbjct: 186 YKFRGRANRLLGKWVEAKTDLATACKLDYD 215
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 474 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKLN 641
+ + ++YD+A++ Y+ AI++NP + R Y +LN +DC AL+L+
Sbjct: 14 KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRALELS 68
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 474 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKLN 641
+ + ++YD+A++ Y+ AI++NP + R Y +LN +DC AL+L+
Sbjct: 14 KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRALELS 68
>Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical
protein F52H3.5 protein.
Length = 179
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 492 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKL 638
+ DEAI +T A+++ P++ + R Q Y NKP + D AL L
Sbjct: 58 RLDEAIEKFTKALEVCPKNPSAYNNRAQAYRLQNKPEKALDDLNEALSL 106
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 492 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKLNCD 647
++ +A+ Y AAI+L+P+S +R YL + + A I D L+L D
Sbjct: 41 QFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKAAIVDLERVLELKPD 92
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 486 EQKYDEAINLYTAAIQLNPQSALLFA-KRGQVYLKLNKPNACIKDCTHALKLN 641
EQKY EA +Y A + F K YLK + ACI+ C L LN
Sbjct: 1260 EQKYVEAYKMYEKAFMATKERNPGFGYKLAFTYLKAKRLFACIETCQKVLDLN 1312
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 477 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALKL 638
A+ ++ +++A Y AI+L+P + + + VY + K C++ C A+++
Sbjct: 15 AYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 68
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 292 MKKKWNRHLTRNRSLNQM 345
MKK ++RHLT NRS N++
Sbjct: 788 MKKTFSRHLTENRSANEL 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,151,565
Number of Sequences: 27780
Number of extensions: 293263
Number of successful extensions: 703
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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