Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0701
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   3.6  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   4.8  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   8.4  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 96  TNFIFSGIVLDLHLSWIKLFTFSAFQNL 13
           TN++   I L   +SW+ L  F+ F +L
Sbjct: 271 TNYLLISIALIFGVSWLPLNLFNLFADL 298


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 444 LSPYVSCFELWASLVCSVAV 385
           L  ++ C  +W SLV  VAV
Sbjct: 268 LGQFIQCVMIWCSLVLYVAV 287


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 IDGKRLFINLDTDNLFNKKRNMNRNI 274
           +DGK   I  D D L  +++ +N+ I
Sbjct: 365 LDGKEAKIRADNDLLMGRRQELNQKI 390


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -3

Query: 546  TSRSFDSVTKTSRFPMKILFSN-GSFMFKDSKKFKLSPYVSCFELWASLVCSVAVFAFI 373
            T + +D  T    F  ++     G F+  D K+   SPY+       SL+     FAFI
Sbjct: 2632 TGQEWDEETNLYNFHARLYDPELGRFLQLDPKEQYASPYLYAGNSPVSLIDPDGQFAFI 2690


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 490 QDLHWEPGRLGYGVEAARG 546
           + L  EPG+ GYG+   +G
Sbjct: 491 EGLRGEPGQPGYGIPGQKG 509


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 435 YVSCFELWASLVCSVAVFAF 376
           ++ C  +W SL+  +AV  F
Sbjct: 290 FIQCTMIWCSLILYIAVTGF 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,470
Number of Sequences: 2352
Number of extensions: 11432
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)