Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0701
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 40 0.006
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 40 0.006
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 40 0.006
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 38 0.041
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 38 0.041
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 38 0.041
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 38 0.041
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 38 0.041
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 38 0.041
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 38 0.041
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 37 0.072
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 37 0.072
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 37 0.072
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 37 0.072
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 37 0.072
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 37 0.072
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 37 0.072
BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein. 36 0.095
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 36 0.095
AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens ... 36 0.095
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 36 0.095
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 36 0.095
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 36 0.17
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 36 0.17
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 36 0.17
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 35 0.29
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 35 0.29
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 35 0.29
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 35 0.29
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 35 0.29
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 35 0.29
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 35 0.29
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 34 0.38
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 34 0.38
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 34 0.38
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 34 0.38
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 34 0.51
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 34 0.51
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 34 0.51
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 34 0.51
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 34 0.51
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 34 0.51
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 34 0.51
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 33 0.67
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 33 0.67
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 33 0.67
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 33 0.67
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 33 0.67
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 33 0.67
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 33 0.67
AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator p... 33 0.67
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 33 0.67
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 33 0.67
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 33 0.67
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 33 0.88
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 33 0.88
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 33 0.88
DQ294957-1|ABB99396.1| 119|Homo sapiens coactivator regulator p... 33 0.88
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 33 0.88
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 33 0.88
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 33 0.88
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 33 0.88
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 33 0.88
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 33 0.88
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 33 0.88
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 33 0.88
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 33 0.88
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 33 0.88
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 33 0.88
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 33 0.88
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 33 0.88
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 33 0.88
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 33 0.88
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 33 0.88
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 33 0.88
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 33 0.88
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 33 0.88
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 33 0.88
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 33 0.88
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 33 0.88
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.2
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.2
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 1.2
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 32 1.5
M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein. 32 1.5
BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear r... 32 1.5
BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear r... 32 1.5
BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein. 32 1.5
BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear r... 32 1.5
BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear r... 32 1.5
BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear r... 32 1.5
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 32 1.5
BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear r... 32 1.5
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 32 1.5
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 32 1.5
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 32 1.5
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 32 2.0
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 32 2.0
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 32 2.0
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 32 2.0
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 32 2.0
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 32 2.0
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 32 2.0
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 32 2.0
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 32 2.0
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 32 2.0
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 32 2.0
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 32 2.0
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 32 2.0
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 32 2.0
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 32 2.0
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 32 2.0
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 32 2.0
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 32 2.0
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 32 2.0
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 32 2.0
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 32 2.0
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 32 2.0
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 32 2.0
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 32 2.0
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 32 2.0
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 32 2.0
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 32 2.0
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 32 2.0
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 32 2.0
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 32 2.0
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 32 2.0
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 32 2.0
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 32 2.0
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 32 2.0
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 32 2.0
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 32 2.0
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 32 2.0
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 32 2.0
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 32 2.0
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 32 2.0
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 32 2.0
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 32 2.0
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 32 2.0
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 32 2.0
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 32 2.0
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 32 2.0
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 32 2.0
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 31 2.7
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 31 2.7
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 31 2.7
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 31 2.7
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 31 2.7
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 31 2.7
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 31 2.7
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 31 2.7
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 31 2.7
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 31 2.7
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 31 2.7
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 31 4.7
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 31 4.7
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 31 4.7
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 31 4.7
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 31 4.7
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 31 4.7
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 31 4.7
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.7
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.7
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 31 4.7
BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein. 31 4.7
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 31 4.7
AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear r... 31 4.7
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 31 4.7
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 31 4.7
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 31 4.7
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.7
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 31 4.7
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 31 4.7
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 30 6.2
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 30 6.2
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 30 6.2
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 30 6.2
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 30 6.2
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 30 6.2
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 30 6.2
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 30 8.2
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 30 8.2
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 30 8.2
EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein. 30 8.2
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 30 8.2
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 30 8.2
BC068483-1|AAH68483.1| 792|Homo sapiens RAD50 interactor 1 prot... 30 8.2
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 30 8.2
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 30 8.2
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 30 8.2
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 30 8.2
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 30 8.2
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF317622-1|AAG42101.1| 821|Homo sapiens RAD50-interacting prote... 30 8.2
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 30 8.2
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 30 8.2
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK----LSRYMAKIEYDHPXEA 649
+FI NL+ TE KL+EVF G + SCSI K +K LS +EY P +A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQA 787
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK----LSRYMAKIEYDHPXEA 649
+FI NL+ TE KL+EVF G + SCSI K +K LS +EY P +A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQA 787
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK----LSRYMAKIEYDHPXEA 649
+FI NL+ TE KL+EVF G + SCSI K +K LS +EY P +A
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQA 800
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 97
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 167 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 218
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 256
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 257
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 257
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 167 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 218
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 37.5 bits (83), Expect = 0.041
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
+F+ NLD V KL+EVF G +V I+ D SR + + ++ EA
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEA 157
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 36.7 bits (81), Expect = 0.072
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDK 601
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D K
Sbjct: 132 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPM-DPK 190
Query: 602 LSR 610
L++
Sbjct: 191 LNK 193
>BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein.
Length = 211
Score = 36.3 bits (80), Expect = 0.095
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
N+IF+ NL +T KL+E F CG ++ I +++ K S+ + +D P A
Sbjct: 134 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK-SKGCGTVRFDSPESA 186
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 36.3 bits (80), Expect = 0.095
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
N+IF+ NL +T KL+E F CG ++ I +++ K S+ + +D P A
Sbjct: 499 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK-SKGCGTVRFDSPESA 551
Score = 35.5 bits (78), Expect = 0.17
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
IF+ NLD V KL+EVF G + I D SR M + ++ EA
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEA 286
>AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ11213 fis, clone PLACE1007969, weakly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 188
Score = 36.3 bits (80), Expect = 0.095
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
N+IF+ NL +T KL+E F CG ++ I +++ K S+ + +D P A
Sbjct: 111 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK-SKGCGTVRFDSPESA 163
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 36.3 bits (80), Expect = 0.095
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
N+IF+ NL +T KL+E F CG ++ I +++ K S+ + +D P A
Sbjct: 470 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK-SKGCGTVRFDSPESA 522
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
IF+ NLD V KL+EVF G + + S D SR M + ++ EA
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRGMGTVTFEQAIEA 233
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 36.3 bits (80), Expect = 0.095
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
N+IF+ NL +T KL+E F CG ++ I +++ K S+ + +D P A
Sbjct: 543 NQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK-SKGCGTVRFDSPESA 595
Score = 35.5 bits (78), Expect = 0.17
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
IF+ NLD V KL+EVF G + I D SR M + ++ EA
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEA 306
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
+ K+F+G LD T+ LR F G++V C +I+KD
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKD 44
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
+ K+F+G LD T+ LR F G++V C +I+KD
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKD 44
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
+ K+F+G LD T+ LR F G++V C +I+KD
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKD 44
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 155
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 34.7 bits (76), Expect = 0.29
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + TE+ +R +F GQI C I+ D LSR A + +
Sbjct: 167 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTF 213
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIV-KDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +I ++ SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIV-KDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +I ++ SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIV-KDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +I ++ SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.38
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIV-KDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +I ++ SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD-IVKD 112
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD-IVKD 112
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD-IVKD 112
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD-IVKD 112
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD-IVKD 112
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD-IVKD 112
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
K+FIGNL TE ++R +F G+++ C II
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII 34
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 425 HETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
++ +G+++N S N K K+ +GN+ T +LR F G ++ C IVKD
Sbjct: 58 YKLHGVNINVEASKN-KSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD-IVKD 112
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
KIF+GN+ T +LR +F G+++ C +VKD
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECD-VVKD 113
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif protein
14 variant protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
KIF+GN+ T +LR +F G+++ C +VKD
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECD-VVKD 113
>AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator
protein.
Length = 156
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
KIF+GN+ T +LR +F G+++ C +VKD
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECD-VVKD 113
>AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator
protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
KIF+GN+ T +LR +F G+++ C +VKD
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECD-VVKD 113
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.67
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKL--SRYMAKIEYDHPXEA 649
K+FIG L+ E L VFG G+IV +++KD + SR A + ++ P +A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEV-LLMKDRETNKSRGFAFVTFESPADA 62
>AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein
SIP protein.
Length = 669
Score = 33.5 bits (73), Expect = 0.67
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKD 595
KIF+GN+ T +LR +F G+++ C +VKD
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECD-VVKD 113
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L+ VFG G I +I SR A I +++P +A
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADA 61
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L+ VFG G I +I SR A I +++P +A
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADA 61
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L+ VFG G I +I SR A I +++P +A
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADA 61
>DQ294957-1|ABB99396.1| 119|Homo sapiens coactivator regulator
protein.
Length = 119
Score = 33.1 bits (72), Expect = 0.88
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
KIF+GN+ T +LR +F G+++ C ++
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV 111
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L+ VFG G I +I SR A I +++P +A
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADA 61
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDH 637
+F+GNL+ VTE L E+F G ++ I D + A + + H
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKH 59
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDI 385
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 366 LFLGNLDITVTESDLRRAFDRFGVITEVDI 395
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDH 637
+F+GNL+ VTE L E+F G ++ I D + A + + H
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKH 59
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+FIG L+ E L+ VFG G I +I SR A I +++P +A
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADA 61
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 356 LFLGNLDITVTESDLRRAFDRFGVITEVDI 385
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 332 LFLGNLDITVTESDLRRAFDRFGVITEVDI 361
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDH 637
+F+GNL+ VTE L E+F G ++ I D + A + + H
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKH 59
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSI 583
+F+GNLD+ VTES LR F G I I
Sbjct: 376 LFLGNLDITVTESDLRRAFDRFGVITEVDI 405
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDH 637
+F+GNL+ VTE L E+F G ++ I D + A + + H
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKH 59
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDH 637
+F+GNL+ VTE L E+F G ++ I D + A + + H
Sbjct: 18 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKH 65
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 479 PLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
P K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 148 PSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 204
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 479 PLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
P K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 148 PSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 204
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 479 PLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
P K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 148 PSHRKLFVGMLNKQQSEEDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 204
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein.
Length = 290
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein.
Length = 250
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 48
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+FIG L T+ LRE FG G++ C ++++D R
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKEC-LVMRDPLTKR 59
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+IV CS+
Sbjct: 23 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV 55
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+FIG L T+ LRE FG G++ C ++++D R
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKEC-LVMRDPLTKR 59
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDV-LVTESKLREVFGYCGQIVSCSIIVKDD 598
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D
Sbjct: 130 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPM-DP 188
Query: 599 KLSR 610
KL++
Sbjct: 189 KLNK 192
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 KHETYGLSLNFLESLNIKLPLLNKIFIGNLDV-LVTESKLREVFGYCGQIVSCSIIVKDD 598
+H G ++ +++ +K + KIF+G L+ TE K+RE FG G+I + + + D
Sbjct: 130 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPM-DP 188
Query: 599 KLSR 610
KL++
Sbjct: 189 KLNK 192
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 107 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 157
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 96
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
L K+FIG L T+ LRE F G + C ++++D + R
Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC-VVMRDPQTKR 74
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
L K+FIG L T+ LRE F G + C ++++D + R
Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC-VVMRDPQTKR 74
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 46 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 96
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ IFI NLD + L +F G I+SC ++ DD S+ A + +D
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC-DDNGSKGYAYVHFD 153
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 143 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 195
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 174
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLV 48
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
L K+FIG L T+ LRE F G + C ++++D + R
Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC-VVMRDPQTKR 74
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLV 48
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ IFI NLD + L +F G I+SC ++ DD S+ A + +D
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC-DDNGSKGYAYVHFD 153
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 75 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 125
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ +FI NLD + L + F G I+SC ++ D+ S+ A + ++
Sbjct: 98 VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-DENGSKGYAFVHFE 146
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ IFI NLD + L +F G I+SC ++ DD S+ A + +D
Sbjct: 90 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC-DDNGSKGYAYVHFD 138
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
++I NLD + + KLR+ F G I S ++++D + S+ + + P EA
Sbjct: 7 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR-SKGFGFVCFSSPEEA 57
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 19 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 71
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYD 634
+ IFI NLD + L +F G I+SC ++ DD S+ A + +D
Sbjct: 105 VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC-DDNGSKGYAYVHFD 153
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like
factor 4 protein.
Length = 486
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 153 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 205
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 174
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 143 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 195
>AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protein
LIP9 protein.
Length = 213
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 36 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 88
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 174
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 179
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEY 631
K+FIG + E+ +R +F GQI C I+ D LSR A + +
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTF 155
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
L K+FIG L T+ LRE F G + C ++++D + R
Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC-VVMRDPQTKR 74
>AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA binding
protein variant protein.
Length = 510
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPXEA 649
K+F+G L+ +E +R +F G I C+I+ D S+ A ++Y EA
Sbjct: 178 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEA 230
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 48
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 48
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
L K+FIG L T+ LRE F G + C ++++D + R
Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDC-LVMRDPQTKR 74
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 48
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 48
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 14 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 47
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSC---SIIVKDDKLSRYMAKIEYD-HPXE 646
+F+GNL V + KL+ F GQI S S+I + LS+ +A I+ HP +
Sbjct: 182 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQ 236
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
L +F+GN+ TE +L+++F G +VS ++
Sbjct: 15 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLV 48
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSC---SIIVKDDKLSRYMAKIEYD-HPXE 646
+F+GNL V + KL+ F GQI S S+I + LS+ +A I+ HP +
Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQ 241
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSC---SIIVKDDKLSRYMAKIEYD-HPXE 646
+F+GNL V + KL+ F GQI S S+I + LS+ +A I+ HP +
Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQ 241
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 482 LLNKIFIGNLDVLVTESKLREVFG 553
++NK++IGNL VT LR++FG
Sbjct: 1 MMNKLYIGNLSPAVTADDLRQLFG 24
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 163 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 211
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 152 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 200
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 152 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 200
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 82 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 130
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 85 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 133
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFG 553
+NK++IGNL VT LR++FG
Sbjct: 1 MNKLYIGNLSPAVTADDLRQLFG 23
>BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein.
Length = 207
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+I CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSV 48
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C-like 1 protein.
Length = 293
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 488 NKIFIGNLDVLVT-ESKLREVFGYCGQIVSCSI 583
+++FIGNL+ LV +S + +F G+I CS+
Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSV 48
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFG 553
+NK++IGNL VT LR++FG
Sbjct: 1 MNKLYIGNLSPAVTADDLRQLFG 23
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 165 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 213
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 154 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 202
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 458 ESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
+++ K P+ KIF+G L E K+RE FG G++ S + + D+K ++
Sbjct: 173 KAMKTKEPV-KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPM-DNKTNK 221
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 494 IFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY---MAKIEYDHPXEA 649
+++G+L VTE+ L E F G I+S SI DK++R A + Y P +A
Sbjct: 47 LYVGDLHPEVTEAMLYEKFSPAGPILSISIC--RDKITRRSLGYAYVNYQQPVDA 99
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 65
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 39 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 71
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 39 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 71
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 65
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 65
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 488 NKIFIGNLDVLVTESKLREVFGYCGQIVSCSII 586
N+IF+G +D ES LR+ F G + I+
Sbjct: 33 NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIV 65
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 73 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 115
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 140
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 140
>EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein.
Length = 80
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 383 NTATEQTSDAQSSKHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCG 562
N+A + + QSS T S ++ +P N +F+G +DV + E+++R F G
Sbjct: 9 NSAISREASTQSSSAAT---SQGYILPEGKIMP--NTVFVGGIDVRMDETEIRSFFARYG 63
Query: 563 QIVSCSIIVKDDKLSR 610
+ II +S+
Sbjct: 64 SVKEVKIITDRTGVSK 79
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>BC068483-1|AAH68483.1| 792|Homo sapiens RAD50 interactor 1
protein.
Length = 792
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 437 GLSLNFLESLNIKLPLL---NKIFIGNLD-VLVTESKLREVFGYCGQIVSCSIIVKDD 598
GL + LE L +P L + +F +D VL+ E +L V GY G SC I+ ++
Sbjct: 375 GLMMLVLEKLATDIPCLLYDDNLFCHLVDEVLLFERELHSVHGYPGTFASCMHILSEE 432
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 140
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 140
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 485 LNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRY 613
+ IFI NLD + L + F G I+SC ++ ++ Y
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 140
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>AF317622-1|AAG42101.1| 821|Homo sapiens RAD50-interacting protein
1 protein.
Length = 821
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 437 GLSLNFLESLNIKLPLL---NKIFIGNLD-VLVTESKLREVFGYCGQIVSCSIIVKDD 598
GL + LE L +P L + +F +D VL+ E +L V GY G SC I+ ++
Sbjct: 404 GLMMLVLEKLATDIPCLLYDDNLFCHLVDEVLLFERELHSVHGYPGTFASCMHILSEE 461
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 491 KIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSR 610
K+F+G L E L +VF GQI S ++VKD + R
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQI-SEVVVVKDRETQR 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,861,989
Number of Sequences: 237096
Number of extensions: 1573403
Number of successful extensions: 3687
Number of sequences better than 10.0: 196
Number of HSP's better than 10.0 without gapping: 3395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3687
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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