Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0700
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    32   0.020
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.0  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   7.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.2  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         23   9.2  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         23   9.2  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         23   9.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 31.9 bits (69), Expect = 0.020
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 447 HGAGGQHLQHARGG---ARGLHLYRHHA 521
           +G GG HL H  GG   A G H ++HHA
Sbjct: 702 YGGGGHHLSHHHGGAAAATGHHHHQHHA 729


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 435 HHEAHGAGGQHLQHARGGARGLH 503
           HH+AH   GQH  HA+  + G H
Sbjct: 649 HHQAHQHQGQH--HAQHHSNGTH 669


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 306  LGDDSFAATEGPGDGRGTSLHAREERVEHALPGEQRVVGGQLLGD 172
            LG+      +GPG+GRG    A +  V  AL      + G +  D
Sbjct: 2113 LGEYGAMGEDGPGEGRGVG-EAEDVEVPKALGDVFESIAGAIFLD 2156


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 618 KCFRCASFLSSPQEHXXRCRAWPPSPG 538
           KC  C    S  Q++    RA  P PG
Sbjct: 382 KCTICHKLFSQRQDYQLHMRAIHPKPG 408


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 447 HGAGGQHLQHARGGARGLHLYRHH 518
           HG+   HL + R G  G H + HH
Sbjct: 416 HGSP-THLHNHRSGGGGRHHHHHH 438


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 268 PGAFGCGKTVISQALSKYSNSDVIIYVGCGERG 366
           PG  G     +  A+ K++     IY GC +RG
Sbjct: 451 PGLDGIPNIALKTAIKKHTAVFRSIYQGCFDRG 483


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = -2

Query: 249 LHAREERVE-HALPGEQRVVGGQLLGDGARLAHGPHLQHAVLLPLTVELRLQHH 91
           L  R   +E H L  +Q+  GG           GPH  H +L+     L + HH
Sbjct: 685 LTTRSPPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEENNMLNMTHH 738


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 50  LPISHRPGTTKSPTWCWRRSSTV 118
           LP + R  ++  PT CW  +  V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 50  LPISHRPGTTKSPTWCWRRSSTV 118
           LP + R  ++  PT CW  +  V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 50  LPISHRPGTTKSPTWCWRRSSTV 118
           LP + R  ++  PT CW  +  V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,729
Number of Sequences: 2352
Number of extensions: 11303
Number of successful extensions: 39
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)