Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0700
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein. 318 9e-87
BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting... 305 7e-83
BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting... 305 7e-83
L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein. 304 2e-82
AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform... 304 2e-82
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 47 7e-05
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 47 7e-05
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 47 7e-05
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 46 1e-04
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 46 1e-04
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 46 1e-04
BC036769-1|AAH36769.1| 504|Homo sapiens fibroblast growth facto... 32 1.7
BC015228-1|AAH15228.1| 315|Homo sapiens FGFRL1 protein protein. 32 1.7
AY358303-1|AAQ88670.1| 504|Homo sapiens FGFRL1 protein. 32 1.7
AK172829-1|BAD18794.1| 440|Homo sapiens protein ( Homo sapiens ... 32 1.7
X06181-1|CAA29547.1| 431|Homo sapiens P-glycoprotein (431 AA) p... 30 9.1
M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane ... 30 9.1
EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette, s... 30 9.1
BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette, s... 30 9.1
>L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein.
Length = 615
Score = 318 bits (782), Expect = 9e-87
Identities = 149/166 (89%), Positives = 160/166 (96%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+L+PP+ KGTVTYIA GNY V DVVLETEFDGER K++MLQVWPVRQPRPVTEKLPAN+
Sbjct: 164 LLLPPRAKGTVTYIAEPGNYTVDDVVLETEFDGERSKFTMLQVWPVRQPRPVTEKLPANY 223
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSDVIIYVGCGERGNEMS
Sbjct: 224 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 283
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFP+L++EI+GVTESIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 284 EVLRDFPQLSLEIDGVTESIMKRTALVANTSNMPVAAREASIYTGI 329
Score = 60.1 bits (139), Expect = 7e-09
Identities = 33/57 (57%), Positives = 34/57 (59%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRALRRLLREKLP 695
GDFSDPVT ATLGIV V FPSINWLISYSKYMRAL + P
Sbjct: 413 GDFSDPVTTATLGIVQ-VFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNFP 468
>BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A, isoform 1 protein.
Length = 617
Score = 305 bits (750), Expect = 7e-83
Identities = 140/166 (84%), Positives = 157/166 (94%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+++PP+ +GTVTYIAP GNY +DVVLE EF+G ++K++M+QVWPVRQ RPVTEKLPANH
Sbjct: 166 IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANH 225
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSDVIIYVGCGERGNEMS
Sbjct: 226 PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFPELT+E++G ESIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 286 EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGI 331
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRAL 668
GDFSDPVT+ATLGIV V FPS+NWLISYSKYMRAL
Sbjct: 415 GDFSDPVTSATLGIVQ-VFWGLDKKLAQRKHFPSVNWLISYSKYMRAL 461
>BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A protein.
Length = 617
Score = 305 bits (750), Expect = 7e-83
Identities = 140/166 (84%), Positives = 157/166 (94%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+++PP+ +GTVTYIAP GNY +DVVLE EF+G ++K++M+QVWPVRQ RPVTEKLPANH
Sbjct: 166 IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANH 225
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSDVIIYVGCGERGNEMS
Sbjct: 226 PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFPELT+E++G ESIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 286 EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGI 331
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRAL 668
GDFSDPVT+ATLGIV V FPS+NWLISYSKYMRAL
Sbjct: 415 GDFSDPVTSATLGIVQ-VFWGLDKKLAQRKHFPSVNWLISYSKYMRAL 461
>L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein.
Length = 617
Score = 304 bits (746), Expect = 2e-82
Identities = 139/166 (83%), Positives = 156/166 (93%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+++PP+ +GTVTYIAP GNY +DVVLE EF+G ++K++M+QVWP RQ RPVTEKLPANH
Sbjct: 166 IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPARQVRPVTEKLPANH 225
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSDVIIYVGCGERGNEMS
Sbjct: 226 PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFPELT+E++G ESIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 286 EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGI 331
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRAL 668
GDFSDPVT+ATLGIV V FPS+NWLISYSKYMRAL
Sbjct: 415 GDFSDPVTSATLGIVQ-VFWGLDKKLAQRKHFPSVNWLISYSKYMRAL 461
>AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform
VA68 protein.
Length = 617
Score = 304 bits (746), Expect = 2e-82
Identities = 139/166 (83%), Positives = 156/166 (93%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+++PP+ +GTVTYIAP GNY +DVVLE EF+G ++K++M+QVWP RQ RPVTEKLPANH
Sbjct: 166 IMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPARQVRPVTEKLPANH 225
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLLTGQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSDVIIYVGCGERGNEMS
Sbjct: 226 PLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMS 285
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFPELT+E++G ESIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 286 EVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGI 331
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRAL 668
GDFSDPVT+ATLGIV V FPS+NWLISYSKYMRAL
Sbjct: 415 GDFSDPVTSATLGIVQ-VFWGLDKKLAQRKHFPSVNWLISYSKYMRAL 461
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 46.8 bits (106), Expect = 7e-05
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 164 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 223
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 224 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 279
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 280 GQMNQPPGARARVALTGL 297
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 46.8 bits (106), Expect = 7e-05
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 154 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 213
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 214 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 269
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 270 GQMNQPPGARARVALTGL 287
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 46.8 bits (106), Expect = 7e-05
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 164 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 223
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 224 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 279
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 280 GQMNQPPGARARVALTGL 297
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 154 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 213
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 214 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 269
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 270 GQMNEPPGARARVALTGL 287
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 90 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 149
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 150 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 205
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 206 GQMNEPPGARARVALTGL 223
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Frame = +1
Query: 118 ERQKYSMLQVWPVRQPRPVTEKLPANHPLL-TGQRVLDSLFPCVQGGTTAIPGAFGCGKT 294
ER Q P+ P ++ +L TG +V+D L P +GG + G G GKT
Sbjct: 154 ERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 213
Query: 295 VISQALSK---YSNSDVIIYVGCGERGNEMSEVLRDFPEL-TVEIEGVTESIMKRTALVA 462
V+ L ++ ++ G GER E +++ + E + ++ T + ALV
Sbjct: 214 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKV----ALVY 269
Query: 463 NTSNMPVAAREASIYTGI 516
N P AR TG+
Sbjct: 270 GQMNEPPGARARVALTGL 287
>BC036769-1|AAH36769.1| 504|Homo sapiens fibroblast growth factor
receptor-like 1 protein.
Length = 504
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 320 YLDRAWEMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTG 168
Y R+ +TVLP PK PG PP S +S PV G AG+ + G
Sbjct: 346 YSFRSAFLTVLPDPKPPG----PPVASSSSATSLPWPVVIGIPAGAVFILG 392
>BC015228-1|AAH15228.1| 315|Homo sapiens FGFRL1 protein protein.
Length = 315
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 320 YLDRAWEMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTG 168
Y R+ +TVLP PK PG PP S +S PV G AG+ + G
Sbjct: 157 YSFRSAFLTVLPDPKPPG----PPVASSSSATSLPWPVVIGIPAGAVFILG 203
>AY358303-1|AAQ88670.1| 504|Homo sapiens FGFRL1 protein.
Length = 504
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 320 YLDRAWEMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTG 168
Y R+ +TVLP PK PG PP S +S PV G AG+ + G
Sbjct: 346 YSFRSAFLTVLPDPKPPG----PPVASSSSATSLPWPVVIGIPAGAVFILG 392
>AK172829-1|BAD18794.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ23990 fis, clone HRC08053, highly similar to
Homo sapiens fibroblast growth factor receptor-like 1
(FGFRL1). ).
Length = 440
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 320 YLDRAWEMTVLPQPKAPGMAVVPPCTQGKSESSTRCPVSSGWLAGSFSVTG 168
Y R+ +TVLP PK PG PP S +S PV G AG+ + G
Sbjct: 316 YSFRSAFLTVLPDPKPPG----PPVASSSSATSLPWPVVIGIPAGAVFILG 362
>X06181-1|CAA29547.1| 431|Homo sapiens P-glycoprotein (431 AA)
protein.
Length = 431
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSL-FPCVQGGTTAIPGAFGCGKTVISQALSKY 321
N+P VL L +G T A+ G+ GCGK+ + Q L ++
Sbjct: 187 NYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF 230
>M23234-1|AAA36207.1| 1279|Homo sapiens protein ( Human membrane
glycoprotein P (mdr3) mRNA, complete cds. ).
Length = 1279
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSL-FPCVQGGTTAIPGAFGCGKTVISQALSKY 321
N+P VL L +G T A+ G+ GCGK+ + Q L ++
Sbjct: 1042 NYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF 1085
>EF034088-1|ABJ53424.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSL-FPCVQGGTTAIPGAFGCGKTVISQALSKY 321
N+P VL L +G T A+ G+ GCGK+ + Q L ++
Sbjct: 1042 NYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF 1085
>BC042531-1|AAH42531.1| 1286|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 4 protein.
Length = 1286
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSL-FPCVQGGTTAIPGAFGCGKTVISQALSKY 321
N+P VL L +G T A+ G+ GCGK+ + Q L ++
Sbjct: 1042 NYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF 1085
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,746,318
Number of Sequences: 237096
Number of extensions: 1780178
Number of successful extensions: 6231
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6221
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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