Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0700
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 295 3e-80
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 44 1e-04
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 32 0.34
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 31 0.60
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 31 0.79
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 31 0.79
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 31 1.0
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 31 1.0
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 31 1.0
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 29 4.2
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 29 4.2
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 4.2
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 4.2
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 7.4
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 9.8
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 295 bits (723), Expect = 3e-80
Identities = 136/166 (81%), Positives = 151/166 (90%)
Frame = +1
Query: 19 MLVPPKXKGTVTYIAPAGNYKVTDVVLETEFDGERQKYSMLQVWPVRQPRPVTEKLPANH 198
+L+PP GT+T++AP+G Y V D +LE EF G +QK+SMLQ+WPVR PRPVTEKL AN+
Sbjct: 155 ILLPPSACGTITFVAPSGQYTVEDTLLELEFAGRKQKFSMLQIWPVRSPRPVTEKLAANN 214
Query: 199 PLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMS 378
PLL GQRVLD+LFPCVQGGTTAIPGAFGCGKTVISQ+LSKYSNSD IIYVGCGERGNEMS
Sbjct: 215 PLLCGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDAIIYVGCGERGNEMS 274
Query: 379 EVLRDFPELTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
EVLRDFPELT+E+EGVT SIMKRTALVANTSNMPVAAREASIYTGI
Sbjct: 275 EVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREASIYTGI 320
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/57 (54%), Positives = 35/57 (61%)
Frame = +3
Query: 525 GDFSDPVTAATLGIVXXVPXXXXXXXXXXXXFPSINWLISYSKYMRALRRLLREKLP 695
GDF+DPVT+ATLGIV V FPSINWLISYS+YMRAL + P
Sbjct: 404 GDFADPVTSATLGIVQ-VFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNYP 459
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +1
Query: 202 LLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSK---YSNSDVIIYVGCGERGNE 372
L+TG +V+D L P +GG + G G GKTV+ L ++ ++ G GER E
Sbjct: 192 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTRE 251
Query: 373 MSEVLRDFPE-LTVEIEGVTESIMKRTALVANTSNMPVAAREASIYTGI 516
+++ + E ++++G + +LV N P AR TG+
Sbjct: 252 GNDLYHEMIEGGVIDLKGKNSKV----SLVYGQMNEPPGARARVCLTGL 296
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 181 KLPANHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYSNSD 333
K+ +P ++L + Q G T A+ G+ GCGK+ I Q L ++ N D
Sbjct: 387 KVEFTYPTRADVKILKGVSLDAQPGQTVALVGSSGCGKSTIIQLLQRFYNPD 438
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 181 KLPANHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYSNSD 333
K+ +P ++L + Q G T A+ G+ GCGK+ I Q L ++ N D
Sbjct: 387 KVEFTYPTRADVKILKGVSLDAQPGQTVALVGSSGCGKSTIIQLLQRFYNPD 438
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 214 QRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYSNSDV 336
+R+LDS+F + G TAI G G GKT + L+K + S++
Sbjct: 79 KRILDSVFGVARPGEVTAIIGPSGAGKTTLLNVLTKRNLSNL 120
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYSNSD 333
N+P +VL ++ G T A+ G GCGK+ I L ++ N D
Sbjct: 1036 NYPTRKDTKVLQGFTLDIKAGKTVALVGHSGCGKSTIMGLLERFYNQD 1083
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 193 NHPLLTGQRVLDSLFPCVQGG-TTAIPGAFGCGKTVISQALSKYSNSD 333
N+P +VL ++ G T A+ G GCGK+ I L ++ N D
Sbjct: 1036 NYPTRKDTKVLQGFTLDIKAGKTVALVGHSGCGKSTIMGLLERFYNQD 1083
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 172 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 303
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 137 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 180
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 172 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 303
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 129 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 172
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 172 VTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVIS 303
+ +L P++TG + +DSL P +G I G GKT I+
Sbjct: 164 IIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIA 207
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 154 VRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSD 333
+++PR V + A P+ ++D++ P ++ G I G G + S S+ +
Sbjct: 65 LKRPRRVMMLIKAGTPV---DMMIDAIVPHLEEGDIIIDG--GNSEYTDSNRRSEQLAAK 119
Query: 334 VIIYVGCGERGNE 372
I++VGCG G E
Sbjct: 120 GIMFVGCGVSGGE 132
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 154 VRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSD 333
+++PR V + A P+ ++D++ P ++ G I G G + S S+ +
Sbjct: 65 LKRPRRVMMLIKAGTPV---DMMIDAIVPHLEEGDIIIDG--GNSEYTDSNRRSEQLAAK 119
Query: 334 VIIYVGCGERGNE 372
I++VGCG G E
Sbjct: 120 GIMFVGCGVSGGE 132
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 326 LEYLDRAWEMTVLPQPKAPGMAVVPPCTQ 240
LE L W + P PKA G ++PP T+
Sbjct: 1822 LEDLANHWNKRINPIPKATGRELIPPSTK 1850
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 326 LEYLDRAWEMTVLPQPKAPGMAVVPPCTQ 240
LE L W + P PKA G ++PP T+
Sbjct: 1822 LEDLANHWNKRINPIPKATGRELIPPSTK 1850
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 435 HHEAHGAGGQHLQHARGGARGLHLYRHHAVG 527
HH G GG H H GG G H HH G
Sbjct: 176 HHGGGGGGGSH-HHGGGGGGGGH--HHHGGG 203
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 435 HHEAHGAGGQHLQHARGGARGLHLYRHHAVG 527
HH++H GG H H GG H HH G
Sbjct: 52 HHDSHHHGGHHGGH-HGGHYESHYESHHHHG 81
>Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical
protein F44D12.2 protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 132 VLLPLTVELRLQHHVGDFVVPGRCDIGNCSLGFGR 28
+L+ L V L H V V RC+ GN F R
Sbjct: 4 ILIQLIVLFTLFHEVNTLVTCSRCEFGNEECNFSR 38
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 435 HHEAHGAGGQHLQHARGGARGLHLYRHHA 521
HHE HGA G+H+ HA H H A
Sbjct: 25 HHE-HGADGEHVHHAGDHCDTQHGGNHQA 52
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 435 HHEAHGAGGQHLQHARGGARGLHLYRHH 518
HH HG+ G H H G H HH
Sbjct: 576 HHGHHGSHGVHHGHHESHGHGHHAPAHH 603
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,958,400
Number of Sequences: 27780
Number of extensions: 240994
Number of successful extensions: 821
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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