Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0699
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   3.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   3.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.2  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 226 PSCTAGATSSLPSHS 182
           P+C+  ++S  PSHS
Sbjct: 194 PTCSEASSSPTPSHS 208


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 204 LHRYHPILTSKFYI 163
           +H Y+P+ T  FY+
Sbjct: 110 VHFYYPVATMSFYV 123


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 429 PVFFGERYDPYXKWHS 382
           P   G   DPY  WH+
Sbjct: 474 PSMHGGVCDPYTPWHT 489


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 452 LHPGVTYKLH 481
           +HPG+T++ H
Sbjct: 157 IHPGMTFRYH 166


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 230 EAVVYGRRNFIVTIPFSRRNSTLTPFN 150
           E  +YG  N  V I     N  LT FN
Sbjct: 48  ENFIYGSMNMTVAITDKIANFMLTFFN 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,617
Number of Sequences: 336
Number of extensions: 1754
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)