Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0699
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein. 146 4e-35
BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein. 146 5e-35
AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein. 146 5e-35
AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein. 146 5e-35
AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding protei... 146 5e-35
AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein. 146 5e-35
AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein. 146 5e-35
AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein. 140 3e-33
AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein. 117 2e-26
DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protei... 96 5e-20
BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protei... 96 5e-20
BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protei... 96 5e-20
AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3 pr... 96 5e-20
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 95 2e-19
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 95 2e-19
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 95 2e-19
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 95 2e-19
BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein. 95 2e-19
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 95 2e-19
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 95 2e-19
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 94 3e-19
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 93 5e-19
AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein. 54 4e-07
AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protei... 38 0.020
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 31 3.0
AK000895-1|BAA91411.1| 275|Homo sapiens protein ( Homo sapiens ... 30 3.9
AK130111-1|BAC85291.1| 148|Homo sapiens protein ( Homo sapiens ... 30 5.2
Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus o... 29 9.1
M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein. 29 9.1
AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus... 29 9.1
>BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 146 bits (354), Expect = 4e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDAGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein.
Length = 163
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding
protein-related factor 2 protein.
Length = 186
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein.
Length = 186
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein.
Length = 186
Score = 146 bits (353), Expect = 5e-35
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR-EA 435
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R A
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHA 128
Query: 436 DYEPXTAP 459
YEP P
Sbjct: 129 SYEPELHP 136
>AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein.
Length = 128
Score = 140 bits (338), Expect = 3e-33
Identities = 65/117 (55%), Positives = 81/117 (69%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYR 429
TGATSE +AK ARR AR+LQKLGF+ L C MPF IR+ F+K R
Sbjct: 69 TGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNR 125
>AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein.
Length = 91
Score = 117 bits (282), Expect = 2e-26
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENGMVTMKLRRPYTTASIWSSGRVTC 258
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G V MKLR+P TA+IWSSG++ C
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIIC 68
Query: 259 TGATSEXQAKIAARRYARALQKL 327
TGATSE +AK ARR AR+LQKL
Sbjct: 69 TGATSEEEAKFGARRLARSLQKL 91
>DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 96.3 bits (229), Expect = 5e-20
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L++IAL+ N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
Query: 445 PXTAP 459
P P
Sbjct: 322 PELFP 326
>BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 96.3 bits (229), Expect = 5e-20
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L++IAL+ N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
Query: 445 PXTAP 459
P P
Sbjct: 322 PELFP 326
>BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 96.3 bits (229), Expect = 5e-20
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L++IAL+ N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
Query: 445 PXTAP 459
P P
Sbjct: 322 PELFP 326
>AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3
protein.
Length = 375
Score = 96.3 bits (229), Expect = 5e-20
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L++IAL+ N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 202 LQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 261
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 262 KSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYE 321
Query: 445 PXTAP 459
P P
Sbjct: 322 PELFP 326
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 161 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 220
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 221 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 280
Query: 445 PXTAP 459
P P
Sbjct: 281 PELFP 285
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 165 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 224
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 225 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 284
Query: 445 PXTAP 459
P P
Sbjct: 285 PELFP 289
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 165 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 224
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 225 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 284
Query: 445 PXTAP 459
P P
Sbjct: 285 PELFP 289
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 164 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 223
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 224 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 283
Query: 445 PXTAP 459
P P
Sbjct: 284 PELFP 288
>BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein.
Length = 288
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 114 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 173
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 174 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 233
Query: 445 PXTAP 459
P P
Sbjct: 234 PELFP 238
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 164 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 223
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 224 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 283
Query: 445 PXTAP 459
P P
Sbjct: 284 PELFP 288
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 94.7 bits (225), Expect = 2e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 165 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 224
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 225 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 284
Query: 445 PXTAP 459
P P
Sbjct: 285 PELFP 289
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 93.9 bits (223), Expect = 3e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 165 LQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 224
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 225 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYE 284
Query: 445 PXTAP 459
P P
Sbjct: 285 PELFP 289
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 93.1 bits (221), Expect = 5e-19
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTGA 267
+ N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SSG++ CTGA
Sbjct: 162 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 221
Query: 268 TSEXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXIRIISFSKKYRE-ADYE 444
SE Q+++AAR+YAR +QKLGF +G+C + F IR+ +++ + YE
Sbjct: 222 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGPVLTHQQFSSYE 281
Query: 445 PXTAP 459
P P
Sbjct: 282 PELFP 286
>AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein.
Length = 45
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 79 IDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRRENG 189
+DI+I NVVC F +CHLNLR+IAL G NV ++R+ G
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVG 45
>AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protein
protein.
Length = 100
Score = 37.9 bits (84), Expect = 0.020
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 274 EXQAKIAARRYARALQKLGFEXXXXXXXXXXXLGTCRMPFXI 399
E Q+++AAR+YAR +QKLGF +G+C + F I
Sbjct: 1 EEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPI 42
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 91 INNVVCSFSVKCHLNLRQIALNGVNVEFR-RENGMVTMKLRRP 216
+ N+V + ++ C L+L+ IAL N E+ + V M++R P
Sbjct: 165 LQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
>AK000895-1|BAA91411.1| 275|Homo sapiens protein ( Homo sapiens
cDNA FLJ10033 fis, clone HEMBA1000872. ).
Length = 275
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 274 HWWRPCTSRVLTTKSKPSCTAGATSSLPSHSHVE 173
HW PC SRV+ K KP TA +S PS H++
Sbjct: 196 HWGPPC-SRVIKRKRKPVATASLSS--PSAVHMD 226
>AK130111-1|BAC85291.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ26601 fis, clone LVR00207. ).
Length = 148
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = -3
Query: 456 CSXWFIVCFPVFFGERYDPYXKWHSTCS*YIDYTKVAEAHFKAEFL*GACITSSSNLRLX 277
CS +F F +FF Y + +W S ++++ AH L G+C +S+S R+
Sbjct: 41 CSFYFY--FYLFFIFIYLFFLRWSLALSPRLEWSGAISAHCNLR-LPGSCHSSASASRVA 97
Query: 276 FTGGARARHA 247
T GAR HA
Sbjct: 98 GTAGAR-HHA 106
>Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2347
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -2
Query: 355 ESCGSALQSRVSVRRVHNVEQQSSLDXHWWRPCTSRVLTTKSKPSCTAGATSS 197
+SC + L ++ + HN+ + H+W + K + SC G +S+
Sbjct: 35 KSCVTNLGQQLDLGTPHNLSEPCIQGCHFWNSVDQKNCALKCRESCEVGCSSA 87
>M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.
Length = 2347
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -2
Query: 355 ESCGSALQSRVSVRRVHNVEQQSSLDXHWWRPCTSRVLTTKSKPSCTAGATSS 197
+SC + L ++ + HN+ + H+W + K + SC G +S+
Sbjct: 35 KSCVTNLGQQLDLGTPHNLSEPCIQGCHFWNSVDQKNCALKCRESCEVGCSSA 87
>AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2347
Score = 29.1 bits (62), Expect = 9.1
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -2
Query: 355 ESCGSALQSRVSVRRVHNVEQQSSLDXHWWRPCTSRVLTTKSKPSCTAGATSS 197
+SC + L ++ + HN+ + H+W + K + SC G +S+
Sbjct: 35 KSCVTNLGQQLDLGTPHNLSEPCIQGCHFWNSVDQKNCALKCRESCEVGCSSA 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,143,784
Number of Sequences: 237096
Number of extensions: 1061551
Number of successful extensions: 2042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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