Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0698
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039052-7|AAO91672.2|  462|Caenorhabditis elegans Hypothetical ...   107   7e-24
AF039052-6|AAF98635.2|  534|Caenorhabditis elegans Hypothetical ...   107   7e-24
Z48585-3|CAA88485.1|  322|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF022985-2|AAB69972.2|  195|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF003386-8|AAB54262.2|  141|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF039052-7|AAO91672.2|  462|Caenorhabditis elegans Hypothetical
           protein T22D1.3b protein.
          Length = 462

 Score =  107 bits (257), Expect = 7e-24
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = +2

Query: 308 SLKTEGDLRDGLSAEDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLV 487
           SL+ +  L DG +  +  A+  GLTYNDF +LPG+I+F   +V L + +TK + +KAPLV
Sbjct: 9   SLELDNSLTDGETVHEMMAHKAGLTYNDFNILPGFINFGVHDVSLETNITKDLKIKAPLV 68

Query: 488 STPMDTVTEADMAISMALCGGIGIIHHNC-TXEYQANEVHKVE 613
           S+PMDTVTE+ MAI MAL GGIGIIH N    E QA EV KV+
Sbjct: 69  SSPMDTVTESGMAIVMALYGGIGIIHGNFPKPEDQAAEVLKVK 111


>AF039052-6|AAF98635.2|  534|Caenorhabditis elegans Hypothetical
           protein T22D1.3a protein.
          Length = 534

 Score =  107 bits (257), Expect = 7e-24
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = +2

Query: 308 SLKTEGDLRDGLSAEDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLV 487
           SL+ +  L DG +  +  A+  GLTYNDF +LPG+I+F   +V L + +TK + +KAPLV
Sbjct: 9   SLELDNSLTDGETVHEMMAHKAGLTYNDFNILPGFINFGVHDVSLETNITKDLKIKAPLV 68

Query: 488 STPMDTVTEADMAISMALCGGIGIIHHNC-TXEYQANEVHKVE 613
           S+PMDTVTE+ MAI MAL GGIGIIH N    E QA EV KV+
Sbjct: 69  SSPMDTVTESGMAIVMALYGGIGIIHGNFPKPEDQAAEVLKVK 111


>Z48585-3|CAA88485.1|  322|Caenorhabditis elegans Hypothetical
           protein ZK673.3 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = +2

Query: 350 EDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLVSTPMDTVTEADMAI 529
           E T  N+  +  + FL    Y++ TA  +     + K++LLK+P+        TE+D A+
Sbjct: 25  EKTGQNATIVNMDSFLEFFAYLNPTAP-IPTVPEIEKQLLLKSPIRCIVCGMETESDSAV 83

Query: 530 SMAL 541
           ++++
Sbjct: 84  TLSI 87


>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 296 TKKMSLKTEGDLRDGLSAEDTFANSEGLTYNDFLLLPGY-IDFTAEEVDLTSPLTKKI 466
           TKK+  K++  L + L     F    GLT    +LL GY +D T+ E    S LT+ I
Sbjct: 522 TKKVFWKSKDSLINALKKGSRFVAEAGLTQLPLVLLNGYPLDVTSIE-RFESSLTQNI 578


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 296 TKKMSLKTEGDLRDGLSAEDTFANSEGLTYNDFLLLPGY-IDFTAEEVDLTSPLTKKI 466
           TKK+  K++  L + L     F    GLT    +LL GY +D T+ E    S LT+ I
Sbjct: 522 TKKVFWKSKDSLINALKKGSRFVAEAGLTQLPLVLLNGYPLDVTSIE-RFESSLTQNI 578


>AF022985-2|AAB69972.2|  195|Caenorhabditis elegans Hypothetical
           protein T15B7.17 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 323 GDLRDGLSAEDTFANSEGLTYNDFLLLP-GYIDFTA 427
           G L DG+S  D   +  G +++DF  +P   ID+ A
Sbjct: 34  GYLPDGVSVNDEMTSGHGRSFSDFFYIPASEIDYYA 69


>Z75547-17|CAN99726.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 411 YPGSSKKSLYVSPSLLAKVSSADNPSRRSPSVFNDIFF 298
           YP  S+++  V+P+L     +A   S R P  F+D+ F
Sbjct: 348 YPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSF 385


>Z75547-16|CAA99907.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 411 YPGSSKKSLYVSPSLLAKVSSADNPSRRSPSVFNDIFF 298
           YP  S+++  V+P+L     +A   S R P  F+D+ F
Sbjct: 361 YPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSF 398


>Z74474-5|CAN99697.1|  432|Caenorhabditis elegans Hypothetical
           protein K10C8.3c protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 411 YPGSSKKSLYVSPSLLAKVSSADNPSRRSPSVFNDIFF 298
           YP  S+++  V+P+L     +A   S R P  F+D+ F
Sbjct: 348 YPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSF 385


>Z74474-4|CAA98956.2|  445|Caenorhabditis elegans Hypothetical
           protein K10C8.3a protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 411 YPGSSKKSLYVSPSLLAKVSSADNPSRRSPSVFNDIFF 298
           YP  S+++  V+P+L     +A   S R P  F+D+ F
Sbjct: 361 YPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSF 398


>AF003386-8|AAB54262.2|  141|Caenorhabditis elegans Hypothetical
           protein F59E12.3 protein.
          Length = 141

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -3

Query: 480 GAFNRIFLVSGDVKSTSSAVKSIYPGSSKKSLYVSPSLLAKVSSADNPSRRSPSVFNDIF 301
           G+F  IF V+     T   +K+  PGS    L +    + +V  +  P      VFN   
Sbjct: 31  GSFGAIFKVTEKSTGTRLVLKAELPGSPSNDLRIELVTMLRVFRSYVPEVTDKGVFNGTK 90

Query: 300 FV 295
           F+
Sbjct: 91  FL 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,459,724
Number of Sequences: 27780
Number of extensions: 258456
Number of successful extensions: 746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)