Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0697
(500 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 193 2e-48
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 164 9e-40
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 164 1e-39
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 155 4e-37
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 136 2e-31
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 136 3e-31
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 126 2e-28
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 122 6e-27
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 115 5e-25
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 113 2e-24
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 103 2e-21
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 102 5e-21
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 101 9e-21
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 100 4e-20
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 96 5e-19
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 89 5e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 88 9e-17
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 85 8e-16
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 85 1e-15
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 84 1e-15
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 83 3e-15
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 79 4e-14
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 77 2e-13
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 77 2e-13
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 77 3e-13
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 76 5e-13
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 76 5e-13
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 75 7e-13
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 72 8e-12
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 70 3e-11
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 70 3e-11
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 62 5e-09
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 61 2e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 60 3e-08
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 60 4e-08
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 55 1e-06
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 53 3e-06
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 53 4e-06
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 51 1e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 51 2e-05
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 47 3e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 4e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 46 4e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 46 5e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 46 5e-04
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 45 8e-04
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 44 0.002
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 44 0.002
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 43 0.003
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 42 0.010
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 41 0.014
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 41 0.018
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 40 0.024
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 40 0.024
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.031
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 40 0.031
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 40 0.042
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 40 0.042
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 40 0.042
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 40 0.042
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 39 0.055
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 39 0.073
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.096
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 38 0.13
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 38 0.13
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.29
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.51
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.51
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 35 0.90
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 35 1.2
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 35 1.2
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.2
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 1.6
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 34 2.1
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 34 2.1
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 34 2.1
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 34 2.1
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 2.7
UniRef50_UPI0000F2B3FB Cluster: PREDICTED: hypothetical protein;... 33 3.6
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 33 3.6
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 3.6
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 3.6
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 4.8
UniRef50_UPI00015A3C61 Cluster: vomeronasal 2 receptor 635; n=26... 32 8.3
UniRef50_Q112B1 Cluster: Taurine catabolism dioxygenase TauD/Tfd... 32 8.3
UniRef50_Q9G865 Cluster: Ribosomal protein L6; n=1; Malawimonas ... 32 8.3
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 32 8.3
UniRef50_A2ELE7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_Q9XD21 Cluster: 50S ribosomal protein L6; n=36; cellula... 32 8.3
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 193 bits (470), Expect = 2e-48
Identities = 89/123 (72%), Positives = 105/123 (85%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 197
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 198 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 377
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 378 IXK 386
I +
Sbjct: 121 IRR 123
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 164 bits (399), Expect = 9e-40
Identities = 72/121 (59%), Positives = 93/121 (76%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 197
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 198 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 377
+KE+AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 378 I 380
+
Sbjct: 121 V 121
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 164 bits (398), Expect = 1e-39
Identities = 73/125 (58%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 191
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 372 KYIXK 386
KYI +
Sbjct: 121 KYIRR 125
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 155 bits (377), Expect = 4e-37
Identities = 70/124 (56%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWF 194
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
G+++ +AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 375 YIXK 386
+ K
Sbjct: 121 KVRK 124
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 136 bits (330), Expect = 2e-31
Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 197
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 198 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGE 371
+K +AA+RTV S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 372 KYI 380
K I
Sbjct: 121 KKI 123
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 136 bits (329), Expect = 3e-31
Identities = 58/108 (53%), Positives = 80/108 (74%)
Frame = +3
Query: 63 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 242
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 243 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXK 386
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK + +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRR 141
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 126 bits (305), Expect = 2e-28
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Frame = +3
Query: 21 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 200
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 201 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY- 377
+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 378 -IXKGKDGXLV*LSLTLPNXTMNXSLEXNSL 467
+ K G V +S + + + LE NSL
Sbjct: 122 RVIKCLPGVTVSISSAVKDEII---LEGNSL 149
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 122 bits (293), Expect = 6e-27
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Frame = +3
Query: 18 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 185
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 186 KWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 365
WFG K A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 115 bits (277), Expect = 5e-25
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 9/121 (7%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 191
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 372 K 374
K
Sbjct: 129 K 129
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 113 bits (273), Expect = 2e-24
Identities = 52/113 (46%), Positives = 69/113 (61%)
Frame = +3
Query: 27 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 206
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 365
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFM 114
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 103 bits (247), Expect = 2e-21
Identities = 50/124 (40%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 194
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 375 YIXK 386
I K
Sbjct: 121 RIRK 124
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 102 bits (244), Expect = 5e-21
Identities = 50/118 (42%), Positives = 81/118 (68%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 218
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 219 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXKGK 392
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK + K
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAK 123
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 101 bits (242), Expect = 9e-21
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 9/130 (6%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 170
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 171 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 350
+ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 351 IRNFLGEKYI 380
I+NFLGEK I
Sbjct: 121 IKNFLGEKII 130
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 99.5 bits (237), Expect = 4e-20
Identities = 52/118 (44%), Positives = 78/118 (66%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 218
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 219 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXKGK 392
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK K K
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAK 123
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 95.9 bits (228), Expect = 5e-19
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWF 194
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGER 117
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 89.0 bits (211), Expect = 5e-17
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = +3
Query: 114 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 284
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 285 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 380
MRAVYAHFPIN + EIRNFLGEK +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRV 183
Score = 33.9 bits (74), Expect = 2.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 128
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 88.2 bits (209), Expect = 9e-17
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 191
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKG 272
+G++KELA V T+CS V+N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 85.0 bits (201), Expect = 8e-16
Identities = 40/119 (33%), Positives = 72/119 (60%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 197
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 198 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+++E + T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/112 (40%), Positives = 71/112 (63%)
Frame = +3
Query: 39 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 218
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 219 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEK 113
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 84.2 bits (199), Expect = 1e-15
Identities = 43/110 (39%), Positives = 71/110 (64%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 224
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 225 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEK 115
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 83.4 bits (197), Expect = 3e-15
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 3 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 176
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 177 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 356
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 357 NFLGEKYIXK 386
NFLGEK + +
Sbjct: 133 NFLGEKNVKR 142
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 79.4 bits (187), Expect = 4e-14
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 191
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
+ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 372 KYI 380
K I
Sbjct: 121 KRI 123
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 77.0 bits (181), Expect = 2e-13
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +3
Query: 204 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 383
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V + ++ I
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVVQMRTGVACSVSQAQKDELIL 89
Query: 384 KGKDGXLV 407
+G D LV
Sbjct: 90 EGNDTELV 97
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/126 (29%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 194
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
+++ A + ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 375 YIXKGK 392
I + K
Sbjct: 121 NIRRAK 126
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 76.6 bits (180), Expect = 3e-13
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = +3
Query: 24 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 188
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 189 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 368
KK A V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 369 EKYIXKGK 392
EK+ + K
Sbjct: 134 EKHPRRAK 141
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 75.8 bits (178), Expect = 5e-13
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Frame = +3
Query: 21 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 179
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 180 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 359
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 360 FLGEK 374
F+G K
Sbjct: 123 FMGHK 127
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 75.8 bits (178), Expect = 5e-13
Identities = 41/124 (33%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 182
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 183 EKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNF 362
E + K+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 363 LGEK 374
LG K
Sbjct: 118 LGRK 121
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 75.4 bits (177), Expect = 7e-13
Identities = 41/111 (36%), Positives = 62/111 (55%)
Frame = +3
Query: 42 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 221
K+ +P+G+T V VTV L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK 117
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 71.7 bits (168), Expect = 8e-12
Identities = 37/111 (33%), Positives = 67/111 (60%)
Frame = +3
Query: 42 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 221
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAIL 70
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGER 119
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Frame = +3
Query: 27 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 191
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/111 (33%), Positives = 64/111 (57%)
Frame = +3
Query: 42 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 221
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEK 112
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 62.5 bits (145), Expect = 5e-09
Identities = 33/110 (30%), Positives = 63/110 (57%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 224
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 225 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGER 116
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 60.9 bits (141), Expect = 2e-08
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 84 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 260
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 261 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXKGK 392
V G+ K++ VYAHFPI + +G ++I + NF GE+ K K
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAK 107
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 191
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 192 FGSKKELAAVRTVCSHVENMIKGV 263
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/111 (31%), Positives = 60/111 (54%)
Frame = +3
Query: 42 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 221
++K+PD + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEK 116
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKW 191
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RY 56
Query: 192 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 371
+++ VC +N I G G++Y +R + F +G +++ ++NFL
Sbjct: 57 GMAQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDR 115
Query: 372 KYIXKGK 392
+ K
Sbjct: 116 SMLGDTK 122
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 53.2 bits (122), Expect = 3e-06
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 194
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 195 GSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 287
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 52.8 bits (121), Expect = 4e-06
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 206
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
A T + V NM++GV++GF+ K++ V
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLV 92
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 51.2 bits (117), Expect = 1e-05
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 224
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 225 TVCSHVENMIKGVTKGF 275
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 234 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXK 386
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI +
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHR 71
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 4e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = +3
Query: 84 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 236
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 237 HVENMIKGVTKG 272
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 46.4 bits (105), Expect = 4e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 194
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+K T S + NM+ GVT+G++ ++ V
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 46.0 bits (104), Expect = 5e-04
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 45 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 221
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAV 296
T + + NM+KGVT+GF+ + V
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIV 91
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 46.0 bits (104), Expect = 5e-04
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 206
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
A T S + NM++GV+KGF+ + V
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELV 91
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 45.2 bits (102), Expect = 8e-04
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 296
+C + V NMI+GV+KG+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKK 206
+ N V IP+ + V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 353
A + NMIKGV+ GF+ K+ + F N + N I+ +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNL 116
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKM 287
A T + + NM++GV GFQ K+
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKL 88
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 206
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 207 ELAAVR-TVCSHVENMIKGVTKGFQYKMRAV 296
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.5 bits (93), Expect = 0.010
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 210 LAAVRTVCSHVENMIKGVTKGF--QYKMRAV 296
T + + NM+ GV++GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 41.1 bits (92), Expect = 0.014
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 296
+C + V NM+ GV++G+ K+ V
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIV 90
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 40.7 bits (91), Expect = 0.018
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 215
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 216 AVRTVC-SHVENMIKGVTKGFQYKMRAV 296
A + S V NM+ GV++G++ ++ V
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELELV 95
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 40.3 bits (90), Expect = 0.024
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 296
+ +C + V NM+ GV+KGF+ ++ V
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELV 90
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 40.3 bits (90), Expect = 0.024
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 206
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKM 287
A T S + NMI GV +GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 39.9 bits (89), Expect = 0.031
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 210 LAAVRTVCSHVENMIKGVTKGF 275
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 39.9 bits (89), Expect = 0.031
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ +K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 296
+ + + ++NMI GV GF + V
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIV 90
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 39.5 bits (88), Expect = 0.042
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 18 MKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 194
M+QI + + IP+ + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+ A + T CS + +MI GVT+GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 39.5 bits (88), Expect = 0.042
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 206
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKM 287
T S +ENMI GV+KGF+ ++
Sbjct: 61 TKQLHGTTNSIIENMIIGVSKGFKKEL 87
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 39.5 bits (88), Expect = 0.042
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+ V NM+ GVT GF+ + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELV 90
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 39.5 bits (88), Expect = 0.042
Identities = 21/86 (24%), Positives = 44/86 (51%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKM 287
+ +NM+ GV+KGF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 39.1 bits (87), Expect = 0.055
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ +++ D V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKM 287
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 38.7 bits (86), Expect = 0.073
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKMR 290
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.096
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 254
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 255 KGVTKGF 275
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 37.9 bits (84), Expect = 0.13
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWF 194
+ N+ V IP G+TV + R + V+GP+G K +FKH +AVD N ++ +
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDD 60
Query: 195 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+E + V NM+ GV G++ K+ V
Sbjct: 61 RPSREFHGLTRAI--VANMLVGVKDGYEKKLEIV 92
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 37.9 bits (84), Expect = 0.13
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 200
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 201 KKELAAVRTVCSHVENMIKGVTKGF 275
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 36.7 bits (81), Expect = 0.29
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + + +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKM 287
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 35.9 bits (79), Expect = 0.51
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 206
VA + IP+ + + + +V VKG +G L +++D V +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+A T S + NM+ GV++GF+ K+ +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELI 90
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 35.9 bits (79), Expect = 0.51
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + + +P L+ + +TV GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 210 LAAVRTVC-SHVENMIKGVTKGFQYKMR 290
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 35.1 bits (77), Expect = 0.90
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 36 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 215
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 216 AVRTVCSHVENMIKGVTKGFQYKM 287
+ S ++ IKG+ +GF+ +
Sbjct: 90 FLNLYKSLIKLKIKGILQGFKLNL 113
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 34.7 bits (76), Expect = 1.2
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+A + + G+ V V + +T+KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQ 278
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + + IP +T ++ + + VKGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 210 LAAV-RTVCSHVENMIKGVTKGFQYKM 287
L + RT+ V NM+ GV+KGF+ ++
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRL 87
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 122
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 256 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 83
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 82 DFT 74
F+
Sbjct: 82 CFS 84
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKW-FGSK 203
+ ++++KIP +++ + + V+G G L+ ++ + ++ + N + L ++ G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 204 KELAAV----RTVCSHVENMIKGVTKGFQYKMRAV 296
K+ A T + +ENM+ GV+KG+ + V
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGYSKTIELV 98
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 224
+++PD +TV + +TVKGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 225 TVCSHVENMIKGVTKGFQYKMRAV 296
T +++ +MI+GV G++ ++ +
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLI 88
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 33.9 bits (74), Expect = 2.1
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 218
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 219 VRTVCSHVENMIKGVTKGFQYKMR 290
RT+ V NM+ GVT GF M+
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQ 88
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 33.9 bits (74), Expect = 2.1
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR---NFKHLAVDIRMVNPRLLKVEKWFGS 200
+ Q + IPD + + ++ + V V GP+G L R +F +D L K E+ S
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 201 KKELAAVRTVCSHVENMIKGVTKGFQYKM 287
+ RT+ S NM+ GV+ G+ K+
Sbjct: 64 QALYGLSRTLLS---NMVTGVSSGWHKKL 89
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 33.5 bits (73), Expect = 2.7
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGS 200
+ N+ + I G+ V + + V+VKGP+G LK +VD + + + S
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 201 KKELAAVRTVCSHVENMIKGVTKGFQYKM 287
K E R++ + NMI GV+ G++ ++
Sbjct: 64 KAEHGLNRSL---ISNMIVGVSTGWKKEL 89
>UniRef50_UPI0000F2B3FB Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 490
Score = 33.1 bits (72), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -2
Query: 397 PSLPXLMYFSPKKLRISIIELPSVVTQLMGK*AYTARILYWKPLVTPL 254
P+ P L+ + K + + L +VTQL+ +Y++ +LY P VTPL
Sbjct: 183 PNCPLLLALAGKTSKAHVGSLLWIVTQLLFGNSYSSLLLYLDPRVTPL 230
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 33.1 bits (72), Expect = 3.6
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 30 VANQKVKI-PDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSK 203
+ N+ +KI P +++ + L+T+KGP G K+L + + N + KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLK 62
Query: 204 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPIN 317
+ T + V N + GVTKGF+ K+ V + N
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLILVGVGYRAN 100
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 33.1 bits (72), Expect = 3.6
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 45 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAV 221
+++P+ +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 222 RTVCSHVENMIKGVTKGFQYKMRAV 296
T +++ +MI+GVT G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 33.1 bits (72), Expect = 3.6
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 206
V VKIP+ + V V +V V+GP+G + L +V + ++ + ++ +K
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKGKMHFPTNPLVSVQVDKGEVKVARQDESHVAKG 63
Query: 207 ELAAVRTVCSHVENMIKGVTKGFQ 278
RT+ V+N ++GV KG++
Sbjct: 64 LHGLTRTL---VKNALEGVVKGYE 84
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 4.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 126 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 305
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 306 FPINCVTTEGNSIIE 350
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_UPI00015A3C61 Cluster: vomeronasal 2 receptor 635; n=26;
Monodelphis domestica|Rep: vomeronasal 2 receptor 635 -
Monodelphis domestica
Length = 862
Score = 31.9 bits (69), Expect = 8.3
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -2
Query: 196 PNHFSTFRRRGFTMRMSTAKCLKFL--LRTPRGPLTVTRRDFTWTVSPSGILTF*FATIC 23
P+ F+ + F+M + + + FL ++ +G + V F+ VS +GILT FA C
Sbjct: 782 PDTFNEAKYLTFSMLVFCSVWISFLPAYQSTKGKVMVAMEIFSILVSSAGILTCIFAPKC 841
Query: 22 FMFGLC 5
++ LC
Sbjct: 842 YVILLC 847
>UniRef50_Q112B1 Cluster: Taurine catabolism dioxygenase TauD/TfdA;
n=1; Trichodesmium erythraeum IMS101|Rep: Taurine
catabolism dioxygenase TauD/TfdA - Trichodesmium
erythraeum (strain IMS101)
Length = 371
Score = 31.9 bits (69), Expect = 8.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -1
Query: 197 SEPFLNLQE----TRVYHANVNSQVFKVPFENXAGPFNCHQTRFHMDRKPVWDFDF 42
++P L L E TR+ AN +S +K+PF+ + + T F + PV+++ F
Sbjct: 264 TQPILELDEYGKVTRINFANSHSYTWKLPFDQMEEFYAAYITFFQYVKNPVYEYCF 319
>UniRef50_Q9G865 Cluster: Ribosomal protein L6; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L6 - Malawimonas
jakobiformis
Length = 172
Score = 31.9 bits (69), Expect = 8.3
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ + IP+ + + + ++ + V G GVL + +++ N RL F K
Sbjct: 4 IGKNPIMIPNNVKIEIINKYLIVIGNLGVLIKKMPD-TIELLKSNNRL------FIKTKN 56
Query: 210 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 296
+ T + NM+ GV+KGF K+R V
Sbjct: 57 FSLWGTYRMLINNMVIGVSKGFIIKLRLV 85
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.9 bits (69), Expect = 8.3
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 270 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 377
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
>UniRef50_A2ELE7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 363
Score = 31.9 bits (69), Expect = 8.3
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 231 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXKGKD 395
C H E M + KG Y MR +Y +GN E NF+ K I G+D
Sbjct: 193 CCHAEVMDYLMQKGADYHMRDIYGKTAFELTMKKGN--FESANFVINKMIELGED 245
>UniRef50_Q9XD21 Cluster: 50S ribosomal protein L6; n=36; cellular
organisms|Rep: 50S ribosomal protein L6 - Leptospira
interrogans
Length = 179
Score = 31.9 bits (69), Expect = 8.3
Identities = 20/83 (24%), Positives = 44/83 (53%)
Frame = +3
Query: 30 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 209
+ ++K+PD + V ++ + VKGP G L + ++ N ++K+E+ +K
Sbjct: 4 IGKAEIKLPDKVEVKQENANIKVKGPLGELFTPIFE-GISVKTEN-GIVKLERSNEDQKV 61
Query: 210 LAAVRTVCSHVENMIKGVTKGFQ 278
+A + + N +KGV++G++
Sbjct: 62 VALHGLTRALLMNCVKGVSQGWE 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,758,642
Number of Sequences: 1657284
Number of extensions: 9072798
Number of successful extensions: 20042
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 19629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19993
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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