Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0696
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49434| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=3.6e-08) 46 3e-05
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_25394| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=1.7e-11) 33 0.17
SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33) 31 0.90
SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33) 31 1.2
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 29 2.7
SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33) 29 2.7
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33) 29 4.8
SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33) 29 4.8
SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0) 29 4.8
SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 4.8
SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33) 29 4.8
SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33) 29 4.8
SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33) 29 4.8
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31) 28 8.4
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_49434| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=3.6e-08)
Length = 120
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 360 EDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRT 539
E K LPL++IK I+K ++ IS E+ L A++ E+F++ L + A +E ++
Sbjct: 9 ESGKLTQLPLSKIKTILKSSPDLANISQESLFLIARSTEVFVNYLAVAALK--KEESKKH 66
Query: 540 LQRNDIATAILKSDQFDXLIDIVP 611
L +A + D L DI+P
Sbjct: 67 LSYKALAQLVEDEDALQFLSDIIP 90
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = +3
Query: 465 KAAEIFIHELTLRAWSHTEENKRRTLQRNDIATAILKSDQFDXLIDIVPRXEVKPTKPRY 644
KA EIF+ L +A ++T+ +TL + I QFD L D+V P
Sbjct: 2 KALEIFMQTLVEKACNYTQARNAKTLSTAHLKRCITSEQQFDFLKDLVENIPDLPANEEE 61
Query: 645 DPXRESPKXGSVLP 686
PK P
Sbjct: 62 GEGEPKPKRRKAQP 75
>SB_25394| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=1.7e-11)
Length = 149
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 381 LPLARIKKIMK--LDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRND 554
LP A + +++K L + V IS EA KAA +F+ T A + +KR+TLQ D
Sbjct: 10 LPNAVVVRLVKEALPDGVS-ISKEARSAIGKAASVFVLYATSCANNFALSHKRKTLQATD 68
Query: 555 IATAILKSDQFDXLI 599
+ +A L+ +F+ I
Sbjct: 69 VISA-LEDMEFEQFI 82
>SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33)
Length = 125
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ R+ + ++ K + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRVHRFLRKGNYAKRVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33)
Length = 126
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/72 (20%), Positives = 33/72 (45%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI ++++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ R+ + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ R+ + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNKLL 97
>SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 125
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ R+ + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNKLL 97
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ R+ + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 134
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 34 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 93
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 94 AVRNDEELNRLL 105
>SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 864
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -3
Query: 185 FSTNFTRQTHRCFYSIITQN*YLNYVLVNYSKFRKQYKHGNQ---*SEYYLEISNRQLLK 15
FS + R HR FYS T + YV+ +Y FR HG+ E +L R LL
Sbjct: 797 FSIEYWRWHHR-FYSGSTATIRIFYVVHHYKPFRVDLPHGHSGYVNLEIFLAKDLRDLLS 855
Query: 14 MRLT 3
+L+
Sbjct: 856 SKLS 859
>SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 396 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 455
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 456 AVRNDEELNRLL 467
>SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 126
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0)
Length = 863
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 763 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 822
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 823 AVRNDEELNRLL 834
>SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 324 DKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEI 479
D L DIQ +E K ++ L ++KK+ K ++E K + VL + A++
Sbjct: 977 DSKLNDIQSKFTETEKEKSQLLDKVKKLEKSEKEFKQLEYNITVLQNQLADM 1028
>SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P++R+ + ++ ISA APV A E E+ A + +NK+ + I
Sbjct: 661 PVSRVHRYLRKCTHHYRISAAAPVYQAAVMEYLTAEILELAGNAARDNKKTRIIPRHILL 720
Query: 564 AILKSDQFDXLI 599
A+ ++ L+
Sbjct: 721 AVANDEELHKLL 732
>SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31)
Length = 125
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +3
Query: 384 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEENKRRTLQRNDIAT 563
P+ RI + ++ + + A APV A E E+ A + +NK+ + +
Sbjct: 26 PVGRIHRHLRKGNYAERVGAGAPVHLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQL 85
Query: 564 AILKSDQFDXLI 599
A+ ++ + L+
Sbjct: 86 AVRNDEELNRLL 97
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 272 GNISVHFFGRGNRR 231
G+ISVH FGRGN R
Sbjct: 116 GDISVHLFGRGNDR 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,323
Number of Sequences: 59808
Number of extensions: 305400
Number of successful extensions: 801
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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