Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0694
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 281 1e-74
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 257 2e-67
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 240 2e-62
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 179 8e-44
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 148 2e-34
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 143 5e-33
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 141 2e-32
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 129 6e-29
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 125 1e-27
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 121 2e-26
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 112 8e-24
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 105 2e-21
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 88 2e-16
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 83 7e-15
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 79 1e-13
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 64 4e-09
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 64 5e-09
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 51 3e-05
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 48 2e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.021
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.028
UniRef50_A0DHY9 Cluster: Chromosome undetermined scaffold_51, wh... 36 1.4
UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 4.3
UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella ve... 33 9.9
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 281 bits (690), Expect = 1e-74
Identities = 127/188 (67%), Positives = 155/188 (82%)
Frame = -3
Query: 631 RLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 452
+LGLD LY G T+VTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGL
Sbjct: 112 KLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGL 171
Query: 451 NVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 272
N+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFKRQFS+YIKLG+
Sbjct: 172 NIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGI 231
Query: 271 XADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIK 92
AD +E YKKAH+AIR DP+ KRWN +KLT +RK +I KA+++
Sbjct: 232 RADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKIAAHKAAYVA 291
Query: 91 RLQAQAEA 68
+LQ++ EA
Sbjct: 292 KLQSETEA 299
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRLFPK 630
+VCA YSHELP+YG++VG TNYAAAY TGLL+ARR+ K
Sbjct: 74 VVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNK 112
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 257 bits (630), Expect = 2e-67
Identities = 128/179 (71%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Frame = -3
Query: 601 TTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 422
TTDV GDEYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFP
Sbjct: 91 TTDVNGDEYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFP 150
Query: 421 GYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVXADAIEAXYK 242
GYDAESK FNAE HRAHIFG HVA+YM +LE +D ++FKRQFS+YIKLG+ AD IE YK
Sbjct: 151 GYDAESKTFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYK 210
Query: 241 KAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIKRLQA-QAEA 68
KAH+AIRADPS KRWN L AERK I QKKAS IK+L+A QAEA
Sbjct: 211 KAHDAIRADPS-IKKVEKPEPAKKKRWNHVXLXHAERKXXIAQKKASXIKKLEAGQAEA 268
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVK 699
I+CA YSHELPRYGVK
Sbjct: 74 ILCAAYSHELPRYGVK 89
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 240 bits (588), Expect = 2e-62
Identities = 111/188 (59%), Positives = 142/188 (75%)
Frame = -3
Query: 631 RLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 452
R G+D +Y G +VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL
Sbjct: 112 RFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGL 171
Query: 451 NVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 272
++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+YIK V
Sbjct: 172 SIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSV 231
Query: 271 XADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIK 92
D +E YKKAH AIR +P KRWN+ K++LA++K+R+ QKKASF++
Sbjct: 232 TPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQKKASFLR 289
Query: 91 RLQAQAEA 68
+ AE+
Sbjct: 290 AQERAAES 297
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRL 639
IVCA Y+HELP+YGVKVG TNYAAAY TGLLLARRL
Sbjct: 74 IVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRL 109
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 179 bits (435), Expect = 8e-44
Identities = 90/185 (48%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Frame = -3
Query: 628 LGLDXLYTGTTDVTGDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 452
+GLD Y G ++TG++YNVE D P F+ LD+GLARTTTG+++F MKG DGG+
Sbjct: 113 IGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGI 170
Query: 451 NVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 272
NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQFSK++ G+
Sbjct: 171 NVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGL 230
Query: 271 XADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIK 92
AD + A Y+K H AIRAD S KR ++LT ERK R+ KKA ++
Sbjct: 231 NADNLVATYQKVHSAIRADAS---PAAKKAAKPSKRHTAKRLTYDERKQRVADKKALLLQ 287
Query: 91 RLQAQ 77
+ Q
Sbjct: 288 LKEQQ 292
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARR 642
+V + YSHELPRYG+KVG TNYAAAY+TGLLLARR
Sbjct: 74 VVASAYSHELPRYGLKVGLTNYAAAYATGLLLARR 108
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 148 bits (358), Expect = 2e-34
Identities = 69/143 (48%), Positives = 96/143 (67%), Gaps = 3/143 (2%)
Frame = -3
Query: 631 RLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 452
+L LD + G +V G+ Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL
Sbjct: 61 KLKLDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGL 120
Query: 451 NVPHSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIK 281
+VPHS KRFPGY + + ++A+ HR IFG HVA YM L+++D + +++QFS Y+K
Sbjct: 121 HVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPERYRKQFSAYLK 180
Query: 280 LGVXADAIEAXYKKAHEAIRADP 212
G+ + A+E Y KAHE IR +P
Sbjct: 181 HGLESSALEDMYLKAHENIRKNP 203
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -2
Query: 728 SHELPRYGVKVGXTNYAAAYSTGLLLARRLFPK 630
S EL YGVKVG TNYAAAY TGLLLARRL K
Sbjct: 29 SAELVHYGVKVGLTNYAAAYCTGLLLARRLLTK 61
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 143 bits (346), Expect = 5e-33
Identities = 75/184 (40%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Frame = -3
Query: 634 QRLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 455
+++GLD +Y G T V G +NV+ F+ LD GL RTTTG RVFG +KGA DGG
Sbjct: 400 KQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGG 459
Query: 454 LNVPHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSK 290
+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+ L+ ++F++QFSK
Sbjct: 460 INIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSK 519
Query: 289 YIKL--GVXADAIEAXYKKAHEAIRADPS--XXXXXXXXXXXXXKRWNKRKLTLAERKNR 122
+ K D++E + K H IR +P K++ KLT A+RK+R
Sbjct: 520 WSKTLEAAKVDSVEKLFTKVHAEIRKNPERVKSTKKNDKPKRDHKKFYPTKLTAAQRKDR 579
Query: 121 IKQK 110
+K K
Sbjct: 580 VKTK 583
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRL 639
++CA S+EL R+GV G +YAAAY+TGLLLARRL
Sbjct: 363 VLCAADSYELKRFGVSTGLASYAAAYATGLLLARRL 398
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 141 bits (341), Expect = 2e-32
Identities = 74/156 (47%), Positives = 99/156 (63%), Gaps = 4/156 (2%)
Frame = -3
Query: 541 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 362
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Query: 361 LHVAEYMRSLEQD---DEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXX 191
HVA+Y++ ++++ + D QFSKY+ V ++IE YKKAH AIRADPS
Sbjct: 231 KHVADYLKQVKEEASSNPDEKCVQFSKYMAAKVLPESIEGMYKKAHAAIRADPSKSLPKK 290
Query: 190 XXXXXXXKR-WNKRKLTLAERKNRIKQKKASFIKRL 86
+ + +KL+ AE++ K K A+ +RL
Sbjct: 291 AKKEGVAHKSYKTKKLSGAEKRAAAKAKVAAIRERL 326
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRLFPK 630
+V A Y+HELP +G++ G TNYAAAY+TGLLLARR K
Sbjct: 97 VVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAK 135
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 129 bits (312), Expect = 6e-29
Identities = 59/141 (41%), Positives = 89/141 (63%)
Frame = -3
Query: 631 RLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 452
+ GL Y G T+ G++Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL
Sbjct: 121 KYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGL 180
Query: 451 NVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 272
++PH+ KRF GYD + K + + +I G VAEY +++++ + F++ F+KY+
Sbjct: 181 DIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQHFAKYLAEDF 240
Query: 271 XADAIEAXYKKAHEAIRADPS 209
+E ++ EAIR DP+
Sbjct: 241 DPTELEDAMEEVFEAIREDPT 261
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -2
Query: 743 VCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRLFPK 630
+CA YSHELP+YG+K G TNYAA Y+TGLL ARRL K
Sbjct: 84 ICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTK 121
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 125 bits (302), Expect = 1e-27
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Frame = -3
Query: 628 LGLDXLYTGTTDVTGDEYNVEPVDNGPG---AFRCYLDVGLARTTTGARVFGAMKGAVDG 458
L LD + G VT + + G + +LDVG+ RTTTG RVF A+KGA DG
Sbjct: 113 LNLDNQFIGVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDG 172
Query: 457 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKL 278
GLN+PH RFPG +FN E R +I G+HVAEYM S++++D D +K F+ Y+K
Sbjct: 173 GLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKAHFNDYLKH 229
Query: 277 GVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASF 98
+ + IE Y AHE IR +P + KL RK R+K+K +
Sbjct: 230 KIDENNIEKMYLTAHEKIRKNPEKKAKKAGKKFIAKHQ-KPTKLNAKLRKQRVKEKVNKY 288
Query: 97 I 95
I
Sbjct: 289 I 289
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARR 642
I+ S EL RYG+ VG NYAAAY+TGLL ARR
Sbjct: 74 ILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARR 108
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 121 bits (292), Expect = 2e-26
Identities = 66/173 (38%), Positives = 97/173 (56%)
Frame = -3
Query: 628 LGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLN 449
+ LD +Y ++ G + +D A R +LD+GLAR+T GARVFGA+KGA D GLN
Sbjct: 107 MSLDEVYR-PKEIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLN 165
Query: 448 VPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVX 269
VPHS +F G+ + F+A+ IFG +++EYM+ L D + +K QFS YIK G+
Sbjct: 166 VPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMKQLRDGDPEKYKTQFSSYIKKGID 224
Query: 268 ADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQK 110
+ I YK A + I DP+ K++ + +LT ER R++ K
Sbjct: 225 PEEIPRIYKSAFDKIAEDPT-RKKKETKDYSGFKKYKQARLTYEERAKRVQAK 276
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 728 SHELPRYGVKVGXTNYAAAYSTGLLLARR 642
S EL RYG+ G TNY+AAY+TG L+ RR
Sbjct: 74 SRELERYGINFGATNYSAAYATGFLIGRR 102
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 112 bits (270), Expect = 8e-24
Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 12/142 (8%)
Frame = -3
Query: 598 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR--- 428
T++T +EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 120 TEIT-EEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCRLAC 176
Query: 427 -FPGYDAESKKFNAEV--------HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLG 275
F D ++ K +V ++ +I G VA+YMR L+++ E+ + +QFS+Y+K G
Sbjct: 177 KFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRKLKKESEEKYNKQFSRYVKAG 236
Query: 274 VXADAIEAXYKKAHEAIRADPS 209
+ AD++E YK AH AIR +P+
Sbjct: 237 ITADSLEKIYKDAHAAIRKNPA 258
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -2
Query: 743 VCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARR 642
VC S ELP+YG+K+G +NY AAY+TGLL+ARR
Sbjct: 74 VCQALSTELPKYGIKLGLSNYPAAYATGLLVARR 107
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 105 bits (251), Expect = 2e-21
Identities = 49/89 (55%), Positives = 66/89 (74%)
Frame = -3
Query: 520 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 341
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Query: 340 RSLEQDDEDSFKRQFSKYIKLGVXADAIE 254
L ++DED++K+Q +YIK + D +E
Sbjct: 131 CFLMEEDEDAYKKQSLEYIKNNITPDMME 159
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRL 639
IVCA Y+HELP+ GVKVG TNYAAAY GLLLA RL
Sbjct: 24 IVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRL 59
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = -3
Query: 628 LGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLN 449
L +D Y G + G N++ P F LD+GL R+T G RVF A+KGA DGG++
Sbjct: 113 LKMDKFYEGNKTIDG---NLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIH 167
Query: 448 VPHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYMRSLEQD 323
+PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 168 IPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2
Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARR 642
+V A S EL R+G+ G TNYAAAY+TGLLLARR
Sbjct: 74 VVAAAESTELKRFGLTSGLTNYAAAYATGLLLARR 108
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 83.0 bits (196), Expect = 7e-15
Identities = 43/100 (43%), Positives = 60/100 (60%)
Frame = -3
Query: 409 ESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVXADAIEAXYKKAHE 230
+SK+ +AEVHR +I+G HVA YM L +D+ + ++ FS YIK + D IE YKK H
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHA 63
Query: 229 AIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQK 110
AIR DPS KR+N +KLT ERK ++ ++
Sbjct: 64 AIRPDPS-PKKSQKQPPKTHKRYNLKKLTYEERKAKLIER 102
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = -3
Query: 580 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 401
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 400 KFNAEVHRAHIFGLHVAEYMRSLE 329
+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/108 (30%), Positives = 61/108 (56%)
Frame = -3
Query: 547 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHI 368
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG ++ E
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG----DERVRCE------ 147
Query: 367 FGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAI 224
H+A++ +L++++ + ++RQFS+Y+ G+ + + ++ +AI
Sbjct: 148 ---HIAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -3
Query: 529 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHV 353
+D+GL R T G + F +MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHI 189
Query: 352 AEYMRSLEQDDEDSFKRQFS 293
+Y+ L+ +DE+ K+QFS
Sbjct: 190 IKYIDLLKNEDEEKLKKQFS 209
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = -3
Query: 592 VTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 422
+TG + V+ ++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 84 LTGMLFAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/102 (25%), Positives = 52/102 (50%)
Frame = -3
Query: 529 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 350
LD+G+ + G +++ +KGA+D GL +PH+ P + I G H+A
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP-------------EDSRIRGEHIA 149
Query: 349 EYMRSLEQDDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAI 224
+Y S++ D++++ +F+ YI+ G+ + I ++ I
Sbjct: 150 QYAESMDDDEKNA---KFANYIRCGLSPEEIPDHFESVKNKI 188
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = -3
Query: 547 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 422
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -3
Query: 547 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 437
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -3
Query: 529 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 422
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_A0DHY9 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 914
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 708 WCKGWXDKLCCSIFNWSAISTKTVSKDLDLTPYTLAQQMSQVMNTMLNLST 556
W K W D+ S F WS ++ T+ D+TP L +++ + TM++ +T
Sbjct: 314 WIKSWLDRYVVS-FYWSIVTMTTIGYG-DITPVNLTERIFVIFMTMISSAT 362
>UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 309
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = -3
Query: 430 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDE------DSFKRQFSKYIKLGVX 269
RF ++ + K+ +++VH H+ HVA Y+ L +D+ +F+ F Y +G+
Sbjct: 129 RFAEFNKDGKQLDSDVHLKHVRDGHVAAYVVILMKDNSLSIEGYHTFRGGFWNYFSMGMD 188
Query: 268 ADAIEAXYK 242
A A A +K
Sbjct: 189 ARASYAFHK 197
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 547 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 422
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_A7RR36 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 625
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = -2
Query: 206 QEERVKERLGQTEALEQTQANIGREEKQNQAKEGFLHQETAGSGGSLNALNII 48
+E + ++ + +++ + G+ + + + KEG QETAG+GG L+A +I
Sbjct: 137 EESKKSQKTVASMIIDKNEEKTGKGKSKKEQKEGIFVQETAGNGG-LSAEEVI 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,325,390
Number of Sequences: 1657284
Number of extensions: 11578225
Number of successful extensions: 34143
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 32557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34111
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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