Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0694
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.28 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.0  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   8.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
 Frame = -3

Query: 325 DDEDSFKR---QFSKYIKLGVXADA 260
           +D+D +K+   QFSK IKLG+  D+
Sbjct: 418 EDKDGYKKFYEQFSKNIKLGIHEDS 442


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 524 CRLSTHHYWCSCLWSYEG 471
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -3

Query: 337 SLEQDDEDSFKRQFSKYIKLGVXADAIEAXYKKAH 233
           ++E+DDED+ ++     I +    + +    KK H
Sbjct: 475 AVEEDDEDAIEKPAPVKISVQEVLNRVRKPTKKLH 509


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 200 ERVKERLGQTEALEQTQANIGREEKQ 123
           +R+ E + QTE++E  +  IGR  ++
Sbjct: 11  KRLFEHMLQTESIEPVKMAIGRPSEK 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,703
Number of Sequences: 336
Number of extensions: 2963
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)