Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0694
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   241   2e-65
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          28   0.27 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.8  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  241 bits (589), Expect = 2e-65
 Identities = 112/171 (65%), Positives = 129/171 (75%)
 Frame = -3

Query: 634 QRLGLDXLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 455
           Q+L LD LY G TDVTG+EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGG
Sbjct: 111 QKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGG 170

Query: 454 LNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLG 275
           LN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKYI LG
Sbjct: 171 LNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLG 230

Query: 274 VXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNR 122
           + AD IE  YK AH +IR  P               RW   +   A R++R
Sbjct: 231 IKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 281



 Score = 71.7 bits (168), Expect = 2e-14
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = -2

Query: 746 IVCAVYSHELPRYGVKVGXTNYAAAYSTGLLLARRLFPK 630
           IVCA YSHELPRYGVKVG TNYAAAY TGLL+ARR+  K
Sbjct: 74  IVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQK 112


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 702 KGWXDKLCCSIFNWSAISTKTVSKDLDLTPYTLAQQMSQV 583
           KG    +CC ++ W  +++ T  K LD+  Y    +  +V
Sbjct: 81  KGLPHVICCRLWRWPDLNSHTELKPLDVCEYAYHLKKDEV 120


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -3

Query: 604  GTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK--GAVDGGLNVP 443
            G TD +GD+  ++  DNG G      +       TG+   G+    G++ GG   P
Sbjct: 2011 GGTDASGDDLEIDACDNGCGGGNGNENDDSGDGATGSGDNGSQHGGGSISGGGGTP 2066


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 457 HRQQHPS*LQRHEH 498
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 621 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 538
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,498
Number of Sequences: 2352
Number of extensions: 12950
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)