Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0692
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.85 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.0  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   6.0  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   6.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
 Frame = +1

Query: 634 QKKVFDNSSIY-RQVVKSF 687
           QKK+FD S I+ R+V+K+F
Sbjct: 107 QKKIFDESVIFERKVMKNF 125


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 475 LYTANRIAHATTCYSTV 525
           LYTAN +     CYST+
Sbjct: 917 LYTANVVCICHVCYSTI 933


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 745 STDSK*YVKYECXVCRWRC 689
           ST +K YV+Y+    RW C
Sbjct: 566 STQAKHYVQYDQGEDRWLC 584


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 745 STDSK*YVKYECXVCRWRC 689
           ST +K YV+Y+    RW C
Sbjct: 799 STQAKHYVQYDQGEDRWLC 817


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 745 STDSK*YVKYECXVCRWRC 689
           ST +K YV+Y+    RW C
Sbjct: 799 STQAKHYVQYDQGEDRWLC 817


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 280 GSWAAVRSHSSRASYLVQNGAVLG 351
           G+W     H+    YLV  GA  G
Sbjct: 838 GAWERQTGHNFTMEYLVSRGAPRG 861


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 238 QRLKRGWTQEEHTQGSWAAVRSHSSRASYLVQNGA 342
           +R+K G    E    S +   S+S  ++ L+QN A
Sbjct: 310 KRMKEGLIPPEPISASLSTSNSNSPSSTNLIQNEA 344


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 238 QRLKRGWTQEEHTQGSWAAVRSHSSRASYLVQNGA 342
           +R+K G    E    S +   S+S  ++ L+QN A
Sbjct: 99  KRMKEGLIPPEPISASLSTSNSNSPSSTNLIQNEA 133


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 238 QRLKRGWTQEEHTQGSWAAVRSHSSRASYLVQNGA 342
           +R+K G    E    S +   S+S  ++ L+QN A
Sbjct: 99  KRMKEGLIPPEPISASLSTSNSNSPSSTNLIQNEA 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,548
Number of Sequences: 336
Number of extensions: 3447
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)