BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0692 (750 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 29 0.94 SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.6 >SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 1822 Score = 28.7 bits (61), Expect = 0.94 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 438 RAFSKRYNLINNSLYSKSHCTCDDMLFDCLKATNTSASHLMGHIY 572 R F K +NL+ L+ S+C C D + TN L G+ Y Sbjct: 1497 RRFDKLHNLLKGYLWLFSNCICRDNITLSRIGTNCMQQLLSGNAY 1541 >SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 700 Score = 25.8 bits (54), Expect = 6.6 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = +3 Query: 6 GADGVSLNTMGVTRSEIASDEEDTKRLLRQLSSINRPLEVTFQQMVNLMAQCQQV 170 G+DG + N G + D+E+ + L L S++ V Q+ N Q Q++ Sbjct: 273 GSDGSNSNFNGGEEQMDSKDQEEIQDYLNSLLSVHEKDGVLLQKFHNSYVQYQKL 327 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,804,368 Number of Sequences: 5004 Number of extensions: 53141 Number of successful extensions: 125 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 125 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 357280532 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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