Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0692
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    95   6e-22
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    95   6e-22
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    95   6e-22

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 95.1 bits (226), Expect = 6e-22
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +3

Query: 318 IIPGTKWCGTGDIAADYHDLGADRLLDRCCRTHDLCPTKVRAFSKRYNLINNSLYSKSHC 497
           I PGT WCG G+ ++  ++LG  +  D CCRTHD+CP  + A   ++ L N + +++  C
Sbjct: 30  IYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 89

Query: 498 TCDDMLFDCLK-ATNTSASHLMGHIYFNLVQVPC 596
            CDD  +DCLK + +T +S+ +G +YFNL+   C
Sbjct: 90  DCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC 123


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 95.1 bits (226), Expect = 6e-22
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +3

Query: 318 IIPGTKWCGTGDIAADYHDLGADRLLDRCCRTHDLCPTKVRAFSKRYNLINNSLYSKSHC 497
           I PGT WCG G+ ++  ++LG  +  D CCRTHD+CP  + A   ++ L N + +++  C
Sbjct: 35  IYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 94

Query: 498 TCDDMLFDCLK-ATNTSASHLMGHIYFNLVQVPC 596
            CDD  +DCLK + +T +S+ +G +YFNL+   C
Sbjct: 95  DCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC 128


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 95.1 bits (226), Expect = 6e-22
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +3

Query: 318 IIPGTKWCGTGDIAADYHDLGADRLLDRCCRTHDLCPTKVRAFSKRYNLINNSLYSKSHC 497
           I PGT WCG G+ ++  ++LG  +  D CCRTHD+CP  + A   ++ L N + +++  C
Sbjct: 35  IYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 94

Query: 498 TCDDMLFDCLK-ATNTSASHLMGHIYFNLVQVPC 596
            CDD  +DCLK + +T +S+ +G +YFNL+   C
Sbjct: 95  DCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKC 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,555
Number of Sequences: 438
Number of extensions: 3970
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)