Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0691
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 42 4e-04
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.032
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9) 34 0.13
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 33 0.22
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.29
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 31 0.90
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 30 2.1
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 30 2.1
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 2.1
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 3.6
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 29 4.8
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 6.3
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.4
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.4
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17) 28 8.4
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 8.4
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/144 (30%), Positives = 73/144 (50%)
Frame = +2
Query: 251 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 430
+L L SY YL A +F+ GF K F K S + E L+K +RGG++
Sbjct: 208 NLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQD 267
Query: 431 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 610
+ D E G + ++ ALD +K + + + +H+ K+ D A++T +I
Sbjct: 268 IKKPEKD-------EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFI 316
Query: 611 EEEFVSQQADTIRSLAGHTSDLKR 682
E F+++Q + I+ LAGH ++LKR
Sbjct: 317 EGNFLTEQVEAIKELAGHLTNLKR 340
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/131 (23%), Positives = 66/131 (50%)
Frame = +2
Query: 290 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYT 469
A++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD---- 54
Query: 470 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIR 649
G+ + A+ AL +K++ + +H+ N D ++ ++E F+ +Q D+I+
Sbjct: 55 -HWGNGLMAMRDALYLEKEINHALLDLHQVADTN----RDPQVQDFLESNFLGEQVDSIK 109
Query: 650 SLAGHTSDLKR 682
+LA + S L+R
Sbjct: 110 TLANYVSTLQR 120
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/144 (27%), Positives = 72/144 (50%)
Frame = +2
Query: 251 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 430
+L L SY Y+ A +F+ GF K F K S + E L K +RGG++
Sbjct: 140 NLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD 199
Query: 431 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 610
+K + ++ G A+ ALD +K + + + +H+ K+ D +++ ++
Sbjct: 200 ---IKRPERDDW----GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWL 248
Query: 611 EEEFVSQQADTIRSLAGHTSDLKR 682
E ++++Q + I+ LAGH ++LKR
Sbjct: 249 ESHYLTEQVEAIKELAGHLTNLKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/144 (25%), Positives = 73/144 (50%)
Frame = +2
Query: 251 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 430
+L L SY Y+ A +F+ GF K F + S + E L K +RGG++
Sbjct: 155 NLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVLQD 214
Query: 431 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 610
+K + ++ G ++ + ALD +K + + + +H+ K+ D +++ ++
Sbjct: 215 ---IKRPERDDWGC--GQDV--IQAALDLEKHVNQALHDLHKVAEKHGD----SQMQDWL 263
Query: 611 EEEFVSQQADTIRSLAGHTSDLKR 682
E ++++Q + I+ LAGH ++LKR
Sbjct: 264 ESHYLTEQVEAIKELAGHMTNLKR 287
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Frame = +2
Query: 251 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 430
+L L SY Y A YF+ + GF K F+K + + E
Sbjct: 21 NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEERE-------------------- 60
Query: 431 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYI 610
H K ++ E G + A+ ALD +K + + + + + KN D A+++ +I
Sbjct: 61 HAEKKPERD-----EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDFI 111
Query: 611 EEEFVSQQADTIRSLAGHTSDLKR 682
E+ F+++Q ++IR L+G+ + LK+
Sbjct: 112 EDHFLTEQVESIRELSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/68 (29%), Positives = 42/68 (61%)
Frame = +2
Query: 479 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 658
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F+++Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 659 GHTSDLKR 682
+ S L+R
Sbjct: 64 NYVSTLRR 71
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 59 IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 220
++S+MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 46 MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95
>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
Length = 117
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 79 VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 201
V SH LSG GC G+GR + E++ R +A LQ +LR
Sbjct: 56 VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 71 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 220
MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 272 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 370
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 513 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS--*VSKPIRFVASRVTPRTSSGS 686
+R++SL R +S SLKT+ + +S NTS + S SK + + + +TSS +
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRSPKTSSKSSPKTSPKTSLKTSSKT 176
Query: 687 *PRT 698
P+T
Sbjct: 177 SPKT 180
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 513 TRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 692
++++SL +S SLK + ++ SL TSR+ K R + + +P+TSS S P
Sbjct: 105 SQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTD--RKKSRNTSPKRSPKTSSKSSP 162
Query: 693 RT 698
+T
Sbjct: 163 KT 164
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 554 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRFITENN 700
+EVT N+ L D +TQ E EE+V + IR + T +KR+IT++N
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDN 237
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 519 RSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS 623
++SL +S SLKT+ ++M SL TSRR S
Sbjct: 154 KTSLKTSLKASLKTSLKTSLKTSMKTSLKTSRRTS 188
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 601 SDLGIVEEVAVFSDFPVDEENPLGKLLLRVQ 509
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 504 KPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRRNS 623
KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 1005 KPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 550 PQGSH*KQRPPPRCRDHSIHRGGIRESAS 636
P+G K PPP R + ++ GG+ SA+
Sbjct: 678 PEGPQKKAAPPPPARPNQVNLGGLARSAT 706
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 473 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 652
E+G ++ L+KAL +++LA +I + E T NS ++ E T E +S+ +
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDTVRELETEISKLEEEKAK 515
Query: 653 LA 658
LA
Sbjct: 516 LA 517
>SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 556 GSH*KQRPPPRCRDHSIHRGGIRESASRYDS*PRGSHLGP 675
G H + P H R G ESA RYD RG+H P
Sbjct: 15 GDHDAESPETPSDGHGSARPGTTESAGRYD---RGTHPAP 51
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 356 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 451
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 482 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 610
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 58 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 103
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 482 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 610
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 54 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 99
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 248 ASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 361
+++ L HYL S + F NYQ +G LF++ D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362
>SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)
Length = 280
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 70 YEGVCSHRCLSGSGCAGRGRLML 138
+EGVC+H + G G GR+ML
Sbjct: 63 HEGVCNHLSMMAPGKHGTGRVML 85
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 172 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQQLPDEQGRIREALQEI 351
+S + R PI G+ R G + + PLSP ++ D R R LQ +
Sbjct: 119 RSKSPVRSTSPILGRSSSPSRRGGSPSRILNSS-PLSPSKQVVDGDNDTVQRQRRELQLL 177
Query: 352 IGRFVGENHWSHKARH*EGWED 417
IG + +SH + W++
Sbjct: 178 IGELKDRDRFSHWKKDVRDWKE 199
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,796,134
Number of Sequences: 59808
Number of extensions: 421910
Number of successful extensions: 1264
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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