Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0691
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 56 2e-08
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 56 2e-08
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 52 5e-07
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 50 1e-06
At3g54000.3 68416.m05969 expressed protein 32 0.42
At3g54000.2 68416.m05968 expressed protein 32 0.42
At1g67230.1 68414.m07652 expressed protein 31 0.97
At5g17220.1 68418.m02018 glutathione S-transferase, putative 30 1.3
At3g02780.1 68416.m00270 isopentenyl-diphosphate delta-isomerase... 29 2.2
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 2.2
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 28 5.2
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 28 5.2
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 28 5.2
At2g06200.1 68415.m00682 expressed protein 28 5.2
At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase... 28 6.8
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing... 27 9.0
At2g24070.1 68415.m02875 expressed protein contains Pfam domain,... 27 9.0
At1g68670.1 68414.m07846 myb family transcription factor contain... 27 9.0
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/138 (25%), Positives = 70/138 (50%)
Frame = +2
Query: 269 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 448
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ S +
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVM 168
Query: 449 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 628
V+ G + + AL +K + E++ +H +KN+D+ + +IE EF++
Sbjct: 169 PLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLT 224
Query: 629 QQADTIRSLAGHTSDLKR 682
+Q + I+ ++ + + L+R
Sbjct: 225 EQVEAIKLISEYVAQLRR 242
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/138 (25%), Positives = 69/138 (50%)
Frame = +2
Query: 269 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 448
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ +
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQS 169
Query: 449 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 628
+ E G + A+ AL +K + E++ +H +KN D+ ++ +IE F++
Sbjct: 170 EFDH---PEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDV----QLADFIESVFLN 222
Query: 629 QQADTIRSLAGHTSDLKR 682
+Q + I+ ++ + S L+R
Sbjct: 223 EQVEAIKKISEYVSQLRR 240
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/185 (21%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Frame = +2
Query: 137 YQNVDQGCRRTLSLP---HCSAYYGQFKD-NHVVANELKALASLYLKRSYHYLLSASYFN 304
+Q ++ + L++P H S +F D + V NE ++ SY Y +YF+
Sbjct: 64 FQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQ---INVEYNVSYVYHSMYAYFD 120
Query: 305 NYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGH 484
+G AK F++ S++ +++ +RGG++ H + + E G
Sbjct: 121 RDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSPISEFEH-AEKGD 177
Query: 485 EIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGH 664
+ A+ AL +K E++ +H+ ++N +D ++ ++E EF+ +Q + I+ ++ +
Sbjct: 178 ALYAMELALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQIEAIKKISDY 233
Query: 665 TSDLK 679
+ L+
Sbjct: 234 ITQLR 238
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/138 (23%), Positives = 64/138 (46%)
Frame = +2
Query: 269 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 448
SY Y +YF+ +GFAK F S + +++ KRGG++ S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVS 163
Query: 449 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 628
+ E G + A+ AL +K E++ + KN+D+ ++ ++E EF+
Sbjct: 164 EFDHE---EKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDV----QLVDFVESEFLG 216
Query: 629 QQADTIRSLAGHTSDLKR 682
+Q + I+ ++ + + L+R
Sbjct: 217 EQVEAIKKISEYVAQLRR 234
>At3g54000.3 68416.m05969 expressed protein
Length = 301
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 498 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRV 662
W + RR + F TGK T T +PRS+N + R KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292
>At3g54000.2 68416.m05968 expressed protein
Length = 301
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 498 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMPRSLNTSRRNS*VSKPIRFVASRV 662
W + RR + F TGK T T +PRS+N + R KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 30.7 bits (66), Expect = 0.97
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 311 QTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTT---LKGDK-GSNYTVEV 478
+ RE F K + +L D+ K +K++T + K++ H LK +K +N +E
Sbjct: 515 KAQRESFEKEWEEL-DERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMER 573
Query: 479 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEI 598
E +AKA + ER + ++ S LLHD E+
Sbjct: 574 ELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEM 613
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 194 YYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSD-DSWE 370
Y + N +A E +A L + YL+S + N R F + + ++SD SW+
Sbjct: 147 YNNRLSSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWK 206
Query: 371 KTIGLIKH 394
K + L H
Sbjct: 207 KLMVLAGH 214
>At3g02780.1 68416.m00270 isopentenyl-diphosphate delta-isomerase II
/ isopentenyl diphosphate:dimethylallyl diphosphate
isomerase II (IPP2) identical to isopentenyl
diphosphate:dimethylallyl diphosphate isomerase (IPP2)
GB:U49259 [Arabidopsis thaliana]
Length = 284
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 607 VLSDLGIVEEVAVFSDFPVDEENPLGKLLLRVQGFGQ 497
+L +LGIV E D PVDE PLG++L + G+
Sbjct: 165 LLDELGIVAE-----DVPVDEFTPLGRMLYKAPSDGK 196
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 230 NELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKT 376
NE AS+ L R + L S Y N+Y T R+G + + + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 359 DSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQ 526
+ WEK L + K +++ T + G +TV+ GH AL+KA+ T K+
Sbjct: 173 EKWEKPKDLDEVYVKYEARLE--DGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKR 226
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 562 H*KQRPPPRCRDHSIHRGGIRESASRYDS*PRGSHLGPQAVHNRE 696
H K+R RD S RGG R S++ DS H GP+ V R+
Sbjct: 349 HSKERRSSDDRDTSSERGGRRSSSATDDSQESSFH-GPERVRVRQ 392
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 299 FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 409
+N + NR G K + WEK IG ++H KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 411 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 319
PP L+ RP +FS SS + SF +P+L
Sbjct: 32 PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62
>At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase I
/ isopentenyl diphosphate:dimethylallyl diphosphate
isomerase I (IPP1) identical to SP|Q38929
Length = 233
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 607 VLSDLGIVEEVAVFSDFPVDEENPLGKLLLRVQGFGQ 497
+ +LGIV E D PVDE PLG++L + G+
Sbjct: 114 LFDELGIVAE-----DVPVDEFTPLGRMLYKAPSDGK 145
>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
protein low similarity to NUC-2 [Neurospora crassa]
GI:1399532, xenotropic and polytropic murine leukemia
virus receptor [Mus musculus castaneus] GI:6093320;
contains Pfam profile PF03105: SPX domain
Length = 287
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 350 LSDDSWEKTIGLIKHVTK 403
L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287
>At2g24070.1 68415.m02875 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 609
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/90 (17%), Positives = 39/90 (43%)
Frame = +2
Query: 389 KHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTK 568
+H++ G + TL+ ++G A++ ALD + + I+ +H ++ +
Sbjct: 480 EHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSMGSSIWSLHSQMEE 539
Query: 569 NSDLLHDAEITQYIEEEFVSQQADTIRSLA 658
+ L+ D + E + + + + S A
Sbjct: 540 MNKLVSDLAVIAKTENFLLDKCENLLASTA 569
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 220 RCSERTEGI-SLTVFETFLPLSPVGLLLQQLPDEQ 321
+CSE+T + VFE F+P+ + L +++ +E+
Sbjct: 63 QCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEE 97
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,477,164
Number of Sequences: 28952
Number of extensions: 296929
Number of successful extensions: 947
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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