Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0690
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like p... 49 1e-04
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 48 2e-04
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 48 2e-04
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 45 0.002
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 44 0.005
UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella ... 42 0.016
UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like p... 40 0.049
UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA... 39 0.11
UniRef50_A0NDP7 Cluster: ENSANGP00000029719; n=1; Anopheles gamb... 38 0.20
UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella ... 36 0.81
UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.1
UniRef50_Q8TIK8 Cluster: Predicted protein; n=1; Methanosarcina ... 36 1.4
UniRef50_Q12W58 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1 r... 34 3.3
UniRef50_Q87Q95 Cluster: GGDEF family protein; n=10; Vibrionales... 34 4.3
UniRef50_A6DA28 Cluster: Ggdef family protein; n=1; Caminibacter... 34 4.3
UniRef50_UPI00015B4737 Cluster: PREDICTED: hypothetical protein;... 33 5.7
UniRef50_A3DG11 Cluster: ABC-2 type transporter; n=1; Clostridiu... 33 7.5
UniRef50_A3LTL9 Cluster: Predicted protein; n=2; Saccharomycetal... 33 7.5
UniRef50_Q5CU35 Cluster: Very low complexity large protein, poss... 33 9.9
UniRef50_Q0V6T9 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 9.9
>UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 819
Score = 49.2 bits (112), Expect = 1e-04
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Frame = -2
Query: 701 HENXHPIISMQVECNVPPLHLRXXXXXXXXXXXXFAISHHALLRKLQHSQ-TIPSSI--N 531
+ N PI M E +P L+ R + ++ ++ L+ T +++ N
Sbjct: 423 YRNSTPINVMIAEAKIPYLNTRIKELGSKFVVKCMSNKNNLVIESLERLLVTAETNVYCN 482
Query: 530 SPKYPFILLHFSNFMAFV------EQYNIYKAVDKWACYEDTFESKFCAMRISINNDLKS 369
+ K P +L F + F E Y Y K A Y + + +IS + +
Sbjct: 483 NFKKPLLLECFQDHQIFTHSVICSEVYISYMGDFKGASYIPEIDLEI-GKKISESKNPNV 541
Query: 368 KEDFDQHITEWPDFHCIYTDASKSDQG----VSLAYYHNNIKVGYGFGLPPSSSIFTAEA 201
+ F+ E + I+TD SK +G V A + + + + +SI+TAE
Sbjct: 542 R--FNLAFPEKLNVTQIFTDGSKIREGDVSVVGFAAWSKHQSFICAYKILDIASIYTAEC 599
Query: 200 LAILHALKYIKEDICARKQNKWLIVSDSMSVLSNL*NNCFSNRINHVIYHIKKLWTDLRN 21
A+LH + I + + + N+++I SDS S LS L NN S + + +I I++ + L +
Sbjct: 600 KALLHTINRITD---SHQNNEYIIFSDSKSALSAL-NNFNSRKSSPLIADIRQKLSYLAD 655
Query: 20 QNITVE 3
QNI V+
Sbjct: 656 QNIKVK 661
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 33/91 (36%), Positives = 48/91 (52%)
Frame = -2
Query: 320 IYTDASKSDQGVSLAYYHNNIKVGYGFGLPPSSSIFTAEALAILHALKYIKEDICARKQN 141
IYTD SK + A +N K+ G LP +SIFTAEA AIL A ++ ++
Sbjct: 965 IYTDGSKVTGATTFAVVDSNRKIIAGGRLPSYNSIFTAEAFAILKACQF-----ASKNAG 1019
Query: 140 KWLIVSDSMSVLSNL*NNCFSNRINHVIYHI 48
K +I +DS+S LS + N ++ + HI
Sbjct: 1020 KSVICTDSLSSLSAIRNWNHNDPTTQEVRHI 1050
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 48.4 bits (110), Expect = 2e-04
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = -2
Query: 320 IYTDASKSDQGVSLAYYHNNIKVGYGFGLPPSSSIFTAEALAILHALKYIKEDICARKQN 141
I+TD SK + +S A + YG LPP SS+ T+E +AIL A++ K ++
Sbjct: 951 IFTDGSKINYTISFAITTETDVLKYGI-LPPYSSVLTSETIAILEAIELTK-----NRRG 1004
Query: 140 KWLIVSDSMSV---LSNL*NNCF-SNRINHVI-YHIKKL 39
K++I SDS+S + N NN F +RI +I H K+
Sbjct: 1005 KFIICSDSLSAVDSIQNTNNNSFYPSRIRSLITQHAPKI 1043
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Frame = -2
Query: 395 ISINNDLKSKEDFDQHITEWPDFHCIYTDASKSDQ----GVSLAYYHNNIKVGYGFGLPP 228
I+I+N FD P+ I+TD SK ++ V A + + F +
Sbjct: 806 INISNSKVPNSKFDSLFPVKPNLIHIFTDGSKLNENNASSVGFAIWSEDQDFNSAFKILD 865
Query: 227 SSSIFTAEALAILHALKYIKEDICARKQNKWLIVSDSMSVLSNL*NNCFSNRINHVIYHI 48
+SI+TAE A+++ + + I ++ ++L+ SDS S L L NN NR + +I +
Sbjct: 866 KASIYTAECKALINVI----DKITVERECEFLVFSDSQSALLALANN--KNRCSPLIAEL 919
Query: 47 KKLWTDLRNQNITVE 3
++ +N+ ++
Sbjct: 920 RQKLASRAEENVKIK 934
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 43.6 bits (98), Expect = 0.005
Identities = 33/79 (41%), Positives = 42/79 (53%)
Frame = -2
Query: 332 DFHCIYTDASKSDQGVSLAYYHNNIKVGYGFGLPPSSSIFTAEALAILHALKYIKEDICA 153
D IYTD SK + V+ A N + LP SIFTAE AIL AL +K A
Sbjct: 955 DCGTIYTDGSKMEGKVACACSFRNKTISRR--LPDGCSIFTAELHAILLALMAVK----A 1008
Query: 152 RKQNKWLIVSDSMSVLSNL 96
+++K++I SDS S L L
Sbjct: 1009 SERSKFIICSDSKSALQAL 1027
>UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 488
Score = 41.9 bits (94), Expect = 0.016
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = -2
Query: 320 IYTDASKSDQGVSLAYY---HNNIKVGYGFGLPPSSSIFTAEALAILHALKYIKEDICAR 150
IYTD SK+ G A+ GF L + + AEA+AIL A + E+ C
Sbjct: 246 IYTDGSKTSDGTGAAFVVLDRGRQIFSAGFSLSKHHTHYQAEAVAILKATMWFAEE-C-- 302
Query: 149 KQNKWLIVSDSMSVLSNL*NNCFSNRINHVIYHIKKLWTDLRNQNITVE 3
+ NK I+SDS S L L + ++ I IK+ T ++ Q ++
Sbjct: 303 QGNKVAIISDSQSALKALYR---TQEVSPTIRDIKRTITTIKRQGRQID 348
>UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 727
Score = 40.3 bits (90), Expect = 0.049
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = -2
Query: 227 SSSIFTAEALAILHALKYIKEDICARKQNKW-LIVSDSMSVLSNL*NNCFSNRINHVIYH 51
++SIFTAE AI +AL DI + + LI SDS+S LS+L + F+ RIN +
Sbjct: 405 TASIFTAECSAISNAL-----DIALQNPGHFFLIFSDSLSALSSLNSTKFTARINPHVLE 459
Query: 50 IKKLWTDLRNQN 15
IKK + ++N
Sbjct: 460 IKKKHNEFISKN 471
>UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to GA16357-PA, partial - Nasonia vitripennis
Length = 826
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -2
Query: 227 SSSIFTAEALAILHALKYIKEDICARKQ-NKWLIVSDSMSVLSNL*NNCFSNRINHVIYH 51
++SIFTAE AI +AL DI + + +LI S+S+S LS+L + F+ RIN +
Sbjct: 542 TASIFTAECSAISNAL-----DIALQNPGHSFLIFSNSLSALSSLNSTKFTARINPHVLE 596
Query: 50 IKKLWTDLRNQN 15
IKK + ++N
Sbjct: 597 IKKKHNEFISKN 608
>UniRef50_A0NDP7 Cluster: ENSANGP00000029719; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000029719 - Anopheles gambiae
str. PEST
Length = 356
Score = 38.3 bits (85), Expect = 0.20
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = -2
Query: 344 TEWPDFHCIYTDASKSDQG-VSLAYYHNNIKVGYGFGLPPSSSIFTAEALAILHALKYIK 168
+E+ + IYTDASKS G + Y L +SI TAE LAI A+++I
Sbjct: 167 SEYCGYVHIYTDASKSPDGQCGIGVYDETNDARIAVQLKLDTSIMTAETLAIKVAMQHIA 226
Query: 167 EDICARKQNKWLIVSDSMSVLSNL*NNCFSNRINHVIYHIKKLWTDLRNQNITVE 3
+ R + ++++DS + + L N S N V + I +L R +T++
Sbjct: 227 Q----RGIQRAVLLTDSQAACTFLKKNRNSRYRNAVAHEILEL---ARTYQVTIQ 274
>UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 743
Score = 36.3 bits (80), Expect = 0.81
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -2
Query: 326 HCIYTDASKSDQGVSLAYY---HNNIKVGYGFGLPPSSSIFTAEALAILHALKYIKEDIC 156
H IYTD SKS+ G A+ + + + + + S++ AE LAI AL+++ D
Sbjct: 487 HQIYTDGSKSESGTGAAFVVFRNGELWMSRSYKMTASNTSSQAEILAIWKALQWLLADGV 546
Query: 155 ARKQNKWLIVSDSMSVLSNL*N 90
K +++DS S L L N
Sbjct: 547 GIK--SCAVITDSQSSLQALAN 566
>UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 250
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 84 AIILKVGKN*HTVTDDKPLILFSGTYVFFYIFQGMQYSKCFCCEN 218
A + G+ T+TDD + LF G V+ IF ++++C+ CE+
Sbjct: 152 AFLDMTGQTDGTITDDSDVFLFGGRRVYKNIFNQNKHAECYTCED 196
>UniRef50_Q8TIK8 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 134
Score = 35.5 bits (78), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 255 GWIWIWFTTFIQHFHSRSTCYIACLEIYKRRHM 157
GWI+++F F+ H+R C ACL ++R M
Sbjct: 28 GWIFLYFFNFLVGSHNRFCCNSACLSAFRRESM 60
>UniRef50_Q12W58 Cluster: Putative uncharacterized protein; n=1;
Methanococcoides burtonii DSM 6242|Rep: Putative
uncharacterized protein - Methanococcoides burtonii
(strain DSM 6242)
Length = 104
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 152 RKQNKWLIVSDSMSVLSNL*NNCFSNRINHVIYHIKKL--WTDLRNQNI 12
RK+N W+ + D++ LSN + + + H+IY KK+ W D R++N+
Sbjct: 7 RKENTWINIKDALIKLSNYLDFGYKSVYGHIIYDTKKVRAWKD-RDKNL 54
>UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 1153
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = -2
Query: 410 FCAMRISINNDLKSKEDFDQHITEWPDFHCIYTDASKSDQGVSLAYYHNNIKVGYGFGLP 231
+ + + +I + +KED++Q+ D I+TD SK+ + + Y + V + L
Sbjct: 869 YLSFKENIKITIPTKEDWEQNSIIKEDEISIFTDGSKTIKSMGAGVYSEQLGVQKSYRLK 928
Query: 230 PSSSIFTAEALAILHALK 177
+I AE LAI A +
Sbjct: 929 NVCNILQAEILAIEEAAR 946
>UniRef50_Q87Q95 Cluster: GGDEF family protein; n=10;
Vibrionales|Rep: GGDEF family protein - Vibrio
parahaemolyticus
Length = 445
Score = 33.9 bits (74), Expect = 4.3
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = -2
Query: 476 EQYNIYKAVDKWACYEDTFESKFCAMRISINNDLKSKEDFDQHITEWPDFHC---IYTDA 306
EQ+NIY D T + + A + +N +LK K + WP +C +YTD
Sbjct: 36 EQFNIYATKDASEGGLSTADITYDAQSLVLNCELK-KSSY-----AWP--YCGISVYTDV 87
Query: 305 SKSDQGVSLAYYHN-NIKVGY---GFGLPPSSSI 216
+K G+ L+ YH +K+ Y G G PS +
Sbjct: 88 AKPTHGIDLSNYHTIRLKLHYEEAGDGQNPSHDL 121
>UniRef50_A6DA28 Cluster: Ggdef family protein; n=1; Caminibacter
mediatlanticus TB-2|Rep: Ggdef family protein -
Caminibacter mediatlanticus TB-2
Length = 731
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +3
Query: 330 IRPFGYVLIKVFFR------FKVIIYRYTHSTEFTLKCIFITSPFINCFVNVILLNKRHK 491
IRP+ YVL+K F+ +K I+ +Y + + + I S FI + ++L+NK K
Sbjct: 272 IRPYNYVLVKGFYESEVKSLYKKILLKYKEELKKVILLLIIVS-FIILIIGIVLINKFSK 330
>UniRef50_UPI00015B4737 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 661
Score = 33.5 bits (73), Expect = 5.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 248 YGFGLPPSSSIFTAEALAILHALKYIKE--DICARKQNKWLIVSDSMSVLSNL*NNCFSN 75
YG + S ++ + +L KY KE D + + KWLIV V + +NCFSN
Sbjct: 517 YGCFVTKSCALLSRVCALLLQYRKYFKEHKDRISVRSIKWLIVYAEDLVNALWYDNCFSN 576
Query: 74 RINHVIYHIKKL 39
R Y +K L
Sbjct: 577 RNASNRYFLKSL 588
>UniRef50_A3DG11 Cluster: ABC-2 type transporter; n=1; Clostridium
thermocellum ATCC 27405|Rep: ABC-2 type transporter -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 238
Score = 33.1 bits (72), Expect = 7.5
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 544 LLPLIPQNTLSFFFTSRILWRLLSNITFTKQLINGLVM-KIHLRVNSVLCVYL*IMTLNL 368
LL + P SF + W ++S T LI GLV+ I ++ ++L Y+ ++T +
Sbjct: 78 LLRVTPMKIFSFIIALTLAWTVVSLAVATILLIGGLVLFGIRMQFGTLLIFYVTLVTATI 137
Query: 367 KKTLIN 350
TLI+
Sbjct: 138 CFTLIS 143
>UniRef50_A3LTL9 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 992
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 84 AIILKVGKN*HTVTDDKPLILFSGTYVFFYIFQGMQYSKCF 206
A ++K+G +TDD LF GT V+ +F QY +C+
Sbjct: 755 AELVKIGLVDGIITDDSDCFLFGGTKVYKNMFNQKQYVECY 795
>UniRef50_Q5CU35 Cluster: Very low complexity large protein,
possible unreal ORF?; n=2; Cryptosporidium|Rep: Very low
complexity large protein, possible unreal ORF? -
Cryptosporidium parvum Iowa II
Length = 1359
Score = 32.7 bits (71), Expect = 9.9
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 318 NTVKIRPFGYVLIKVFFRFKVIIYRYTHSTEFTLKCIFITSPFINCF-----VNVILLNK 482
N VKIR GY+LI+ R ++++ + + L I F +CF +++ L N+
Sbjct: 671 NKVKIRKKGYILIEWVNRIRILLRMRNDAENYYLNNIIYRRRFKDCFNIWRGLSLRLRNQ 730
Query: 483 RHKIREVKKNE 515
+ KI + +N+
Sbjct: 731 KKKIMDYLENK 741
>UniRef50_Q0V6T9 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 229
Score = 32.7 bits (71), Expect = 9.9
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 587 HHALL---RKLQHSQTIPSSINSPKYPFILLHFSNFMAFVEQYNIYKAVDKWACYEDTFE 417
HH L RKL S T S I P YP I++ A E N KA + W ++ +E
Sbjct: 128 HHLLALTKRKLALSPTTLSGITKPGYPGIMIFSGPASAVTEHVNTLKA-ENWQAFQVRYE 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,462,709
Number of Sequences: 1657284
Number of extensions: 13046493
Number of successful extensions: 33108
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 31947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33100
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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