BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0690 (750 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0628 + 11364169-11364233,11365135-11365648 29 3.9 06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 28 6.9 01_05_0323 - 20934429-20934447,20934658-20934774,20934815-209349... 28 9.1 >09_02_0628 + 11364169-11364233,11365135-11365648 Length = 192 Score = 29.1 bits (62), Expect = 3.9 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Frame = -2 Query: 551 TIPSSIN-SPKYP-----FILLHFSNFMAFVEQYNIYKAVDKW 441 ++P +I SP +P F LHF+NF + Q +IY +KW Sbjct: 79 SVPLNITQSPNWPTDWTYFHFLHFANFEQQLRQLDIYYGKNKW 121 >06_03_1507 - 30646168-30646254,30646350-30646490,30648109-30648202, 30648445-30648509,30648934-30649176,30649442-30649499, 30649957-30650037,30650323-30650533,30650975-30651141, 30651216-30651268,30651600-30651681,30651765-30651914, 30652027-30652111,30652189-30652393,30652502-30652573, 30652911-30653456 Length = 779 Score = 28.3 bits (60), Expect = 6.9 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -2 Query: 323 CIYTDASKSDQGVSLAYYHNNIKVGYGFGLPPSSSIFT 210 C Y + ++ + SLAY HN I G G+ P IFT Sbjct: 468 CRYCE-NRQQRESSLAYNHNAIAAGRIDGIDPMEQIFT 504 >01_05_0323 - 20934429-20934447,20934658-20934774,20934815-20934964, 20935578-20935828,20936403-20936449,20936852-20936976, 20937039-20937154,20937194-20937284,20937772-20937893, 20938667-20938894,20938990-20939221,20941598-20941797 Length = 565 Score = 27.9 bits (59), Expect = 9.1 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = -3 Query: 544 LLPLIPQNTLSFFFTSRILWRLLSNITFTKQLINGLVMKIHLR---VNSVLCVYL*IMTL 374 L+ +I ++ F T ++W L+ F K + + +H+ + +++C +L I T Sbjct: 157 LVGVINPGRMTLFGTLLVIWGLVKEALFGKPVNSDPTQSVHVYPTILIALICAFLSI-TY 215 Query: 373 NLKKT 359 N+KKT Sbjct: 216 NVKKT 220 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,891,785 Number of Sequences: 37544 Number of extensions: 340128 Number of successful extensions: 738 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 713 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 737 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1992480932 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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