Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0689
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 30 1.4
At1g23860.2 68414.m03010 splicing factor RSZp21 (RSZP21) / 9G8-l... 30 1.9
At1g23860.1 68414.m03009 splicing factor RSZp21 (RSZP21) / 9G8-l... 30 1.9
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.5
At2g22720.3 68415.m02692 expressed protein 29 2.5
At2g22720.2 68415.m02691 expressed protein 29 2.5
At2g22720.1 68415.m02693 expressed protein 29 2.5
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 29 2.5
At5g13680.1 68418.m01593 IKI3 family protein weak similarity to ... 28 5.8
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 28 7.6
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 28 7.6
At1g01450.1 68414.m00060 protein kinase-related contains eukaryo... 28 7.6
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 609 CERVGSCKPQRMGGRHCPSLVQRRACQEHQGCS 707
C++ C M G+ CP L C+++ GCS
Sbjct: 605 CKQYTPCGCLSMCGKDCPCLTNETCCEKYCGCS 637
>At1g23860.2 68414.m03010 splicing factor RSZp21 (RSZP21) / 9G8-like
SR protein (SRZ21) nearly identical to 9G8-like splicing
factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21
protein [Arabidopsis thaliana] GI:2582643
Length = 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 482 GHSNRACRLGPQ*WRSGAPSERRRNYPSPGSTGSRPGNSSHRNSPRK 342
GH R CR G R +PS RRR P G R+ PR+
Sbjct: 98 GHFARECRRGRGSVRRRSPSPRRRRSPDYGYARRSISPRGRRSPPRR 144
>At1g23860.1 68414.m03009 splicing factor RSZp21 (RSZP21) / 9G8-like
SR protein (SRZ21) nearly identical to 9G8-like splicing
factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21
protein [Arabidopsis thaliana] GI:2582643
Length = 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 482 GHSNRACRLGPQ*WRSGAPSERRRNYPSPGSTGSRPGNSSHRNSPRK 342
GH R CR G R +PS RRR P G R+ PR+
Sbjct: 98 GHFARECRRGRGSVRRRSPSPRRRRSPDYGYARRSISPRGRRSPPRR 144
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -2
Query: 602 SQSRRWYRIPTTSPSLKQRNRSLRKSPGSPGNNLPISSKRGHSNRACRLGP---Q*WRSG 432
S SRR R + SL R R + SP + PI R ++ R P + RS
Sbjct: 255 SNSRRRSRSRSVRRSLSPRRRRIH-SPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSP 313
Query: 431 APSERRRNYPSP 396
+P RRR PSP
Sbjct: 314 SPPARRRRSPSP 325
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 536 LRKSPGSPGNNLPISSKRGHSNRACRLGPQ*WRSGAPSERRRNYPSPGSTGSRPGNSSHR 357
+++ P S G+ P SS S R G Q R G+ + R+ PGS + G S++R
Sbjct: 301 MQQRPASSGSQRPASSG---SQRPASSGSQ--RPGSSTNRQAPMRPPGSGSTMNGQSANR 355
Query: 356 N 354
N
Sbjct: 356 N 356
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 536 LRKSPGSPGNNLPISSKRGHSNRACRLGPQ*WRSGAPSERRRNYPSPGSTGSRPGNSSHR 357
+++ P S G+ P SS S R G Q R G+ + R+ PGS + G S++R
Sbjct: 404 MQQRPASSGSQRPASSG---SQRPASSGSQ--RPGSSTNRQAPMRPPGSGSTMNGQSANR 458
Query: 356 N 354
N
Sbjct: 459 N 459
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 536 LRKSPGSPGNNLPISSKRGHSNRACRLGPQ*WRSGAPSERRRNYPSPGSTGSRPGNSSHR 357
+++ P S G+ P SS S R G Q R G+ + R+ PGS + G S++R
Sbjct: 72 MQQRPASSGSQRPASSG---SQRPASSGSQ--RPGSSTNRQAPMRPPGSGSTMNGQSANR 126
Query: 356 N 354
N
Sbjct: 127 N 127
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 627 CKPQRMGGRHCPSLVQRRACQEHQGCSSD 713
C + G+ CP L C+++ GCS D
Sbjct: 450 CTCKSKCGQQCPCLTHENCCEKYCGCSKD 478
>At5g13680.1 68418.m01593 IKI3 family protein weak similarity to
SP|O95163 IkappaB kinase complex-associated protein (IKK
complex-associated protein) (p150) {Homo sapiens};
contains Pfam profile PF04762: IKI3 family
Length = 1319
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 603 LPEPQVVSHSDHEPQLETTQSITPQVSRKSGQQSPNFKQAWS 478
L E +VV H DH P T ++ ++ +SP AW+
Sbjct: 491 LQEVEVVCHEDHVPDQVTCSGFKASITFQTLLESPVLALAWN 532
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 27.9 bits (59), Expect = 7.6
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = -2
Query: 581 RIPTTSPSLK-QRNRSLRKSPGSPGNNLPISSKRGHS-NRACRLGPQ*WRSGAPSERRRN 408
R+ SPS K Q S P P+ + S NR+ L + R A S RR
Sbjct: 17 RLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVALSVKEIRQAAGSRRRSE 76
Query: 407 YPSPGSTGSRPGNSSHRNSPRK*TSLDK 324
P S SR S +SP K S +K
Sbjct: 77 DPVASSAKSRLFFDSSSSSPSKRKSSNK 104
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 609 CERVGSCKPQRMGGRHCPSLVQRRACQEHQGC 704
C + C + G+ CP L+ C+++ GC
Sbjct: 649 CRQFNPCNCKIACGKECPCLLNGTCCEKYCGC 680
>At1g01450.1 68414.m00060 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 470
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 168 VTYISGVNFKNNLSKLLIIFLFRKKNNIHIKEVC 269
V Y+ G + L++ L RK +HIKEVC
Sbjct: 80 VYYLCGFTDEEKKECFLVMELMRKTLGMHIKEVC 113
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,245,528
Number of Sequences: 28952
Number of extensions: 381014
Number of successful extensions: 1016
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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