Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0688
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   3.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.4  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    23   7.6  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 575 RKGRPKEIEIVKTEDALGLTITDNGAGYAFIKR 673
           R+   +  E+++  + LGL+I +NG+   FI R
Sbjct: 134 RRNNLRGEELLQMVEVLGLSILNNGSAPTFIGR 166


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +2

Query: 530 LLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAF 664
           LL G        +   + +PK I +++  + LGL + + G  + F
Sbjct: 117 LLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTF 161


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 576 LCAKIKSSNPICPP 535
           LC K++S   +CPP
Sbjct: 163 LCEKVRSGVAVCPP 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,996
Number of Sequences: 2352
Number of extensions: 15057
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)