Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0685
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 152 5e-37
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 152 5e-37
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 152 5e-37
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 152 5e-37
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 152 5e-37
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 152 5e-37
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 152 5e-37
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 150 1e-36
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 150 2e-36
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 144 7e-35
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 143 2e-34
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 8e-12
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 1.9
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 1.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 1.9
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 1.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 1.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 1.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 1.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 1.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 1.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 1.9
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 30 3.3
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 30 3.3
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 30 3.3
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 30 3.3
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 29 4.3
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 29 7.5
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 29 7.5
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 29 7.5
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 29 7.5
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 28 9.9
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 28 9.9
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 28 9.9
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 28 9.9
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 152 bits (368), Expect = 5e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 150 bits (364), Expect = 1e-36
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSC IHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 150 bits (363), Expect = 2e-36
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 144 bits (350), Expect = 7e-35
Identities = 65/84 (77%), Positives = 74/84 (88%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKL KLHYC
Sbjct: 15 RGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSC IHSKVVRNRS++ R+ RTPP
Sbjct: 75 VSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 143 bits (346), Expect = 2e-34
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +3
Query: 48 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYC 227
RGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ + LPKLY KLHYC
Sbjct: 15 RGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYC 74
Query: 228 VSCAIHSKVVRNRSKKDRRIRTPP 299
VSCAIHSKVVRNRS++ + RTPP
Sbjct: 75 VSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 189 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 299
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +3
Query: 117 KFVIRNIVEAAAVRDINDASVY 182
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 332
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 78 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 257
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 258 R 260
R
Sbjct: 409 R 409
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 102 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 263
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 78 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 257
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 258 R 260
R
Sbjct: 409 R 409
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 78 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 257
NC + DK +K++ E R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 258 R 260
R
Sbjct: 409 R 409
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 102 DKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 263
DK +K + + E R + YPMFQ+P+ LH ++ H V RN
Sbjct: 357 DKLLKHYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 149 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNV 54
R FYD H++ D L+ H VC++ F V
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKV 186
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 149 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNV 54
R FYD H++ D L+ H VC++ F V
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKV 186
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 149 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNV 54
R FYD H++ D L+ H VC++ F V
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKV 186
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 149 RRFYDVPNHELFDSLVLWHAPRAVCASHSFNV 54
R FYD H++ D L+ H VC++ F V
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKV 186
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 246 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 347
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 246 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 347
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 246 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 347
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 246 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 347
SK + + KKD++ RTPP+S SR + +R
Sbjct: 139 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,400,102
Number of Sequences: 237096
Number of extensions: 884814
Number of successful extensions: 1913
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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