Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0684
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   6.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.0  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 205 NAGIVTLNRPKALNSLNTSMVSKLLPQLQEW 297
           NAG   LN   A + L  S++S  L    +W
Sbjct: 106 NAGNAILNGIVASSKLRASLISSCLSFFSQW 136


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 435 WKL*NPIYRIYK 470
           W + NP YR+YK
Sbjct: 23  WHVENPTYRLYK 34


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -3

Query: 667 LYLSICHQSTLSTIPN 620
           ++L++CH   ++ +PN
Sbjct: 8   IFLTLCHAEPIAELPN 23


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 459 RIYKWNH 479
           +IYKWNH
Sbjct: 298 KIYKWNH 304


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 404 KNLGPSILSMAAFTSPPAQKAFSPAP 327
           ++ G    + AA  +PP ++A SP P
Sbjct: 32  EDTGSMTPNSAASPAPPEEEAASPTP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,536
Number of Sequences: 336
Number of extensions: 4125
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)