Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0684
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   1.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   1.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 557 SGMAINVFSVATLYLPWTESPRPPPI 480
           SGM    FS+A LY P T+  + P I
Sbjct: 137 SGMFTTAFSIAVLYRPDTKYMKFPAI 162


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 557 SGMAINVFSVATLYLPWTESPRPPPI 480
           SGM    FS+A LY P T+  + P I
Sbjct: 137 SGMFTTAFSIAVLYRPDTKYMKFPAI 162


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 227 IDPKH*IPSTHLWCQNYYHNFKNGRNQS 310
           +D K   P  + +  NY+++  NG N S
Sbjct: 126 LDQKFIFPQENNYNDNYFYSKSNGSNSS 153


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 364 HHHQHRKLFLQH 329
           HHH H+   LQH
Sbjct: 352 HHHHHQTQSLQH 363


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 709 AWYKVXSYSSFXQRLYLSICHQSTLSTI 626
           ++  V +  +F    YL+ICH   + TI
Sbjct: 125 SYVSVLTIVAFSMERYLAICHPLRVYTI 152


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 239 ALGRLRVTMPALFNASNKTSGSCED 165
           ALG   +  P +   +N  SGS ED
Sbjct: 413 ALGAAALVAPGMEEPTNTASGSNED 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,023
Number of Sequences: 438
Number of extensions: 5177
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)