Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0684
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 166 1e-41
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 165 3e-41
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 156 2e-38
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 138 3e-33
At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family pr... 138 3e-33
At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 136 1e-32
At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family pr... 131 4e-31
At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr... 117 7e-27
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 57 1e-08
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 56 3e-08
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 55 4e-08
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 55 4e-08
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 51 9e-07
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 38 0.009
At3g52410.1 68416.m05764 hypothetical protein contains Pfam prof... 31 0.62
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 30 1.9
At1g07750.1 68414.m00837 cupin family protein similar to legumin... 29 3.3
At3g57830.1 68416.m06447 leucine-rich repeat transmembrane prote... 29 4.4
At2g28680.1 68415.m03486 cupin family protein similar to legumin... 29 4.4
>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
CoA-thioester hydrolase (CHY1) identical to gi:8572760;
contains Pfam profile PF00388 enoyl-CoA
hydratase/isomerase family protein
Length = 378
Score = 166 bits (404), Expect = 1e-41
Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 8/179 (4%)
Frame = +1
Query: 163 MSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAG 336
M+SQ VL E ++ I+TLNRPK LN+L+ M+S+LL +E+ S LVI+KG G
Sbjct: 5 MASQS-QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG 63
Query: 337 EKAFCAGGDVKAAIDKIE------GPRFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLG 498
+AFCAGGDV A + I G +F +EY +N+++ Y ++ +NGI MGGG G
Sbjct: 64 -RAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAG 122
Query: 499 LSVHGRYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGDRLKGKDVV 675
+SVHGR+R+ATE T+ AMPET +GLFPDVG S+FL RL G Y+GLTG RL G +++
Sbjct: 123 VSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEML 181
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 683 GIATHFVPSKRLYELEMLLSR 745
G+ATHFVPS RL LE L R
Sbjct: 184 GLATHFVPSTRLTALEADLCR 204
>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 378
Score = 165 bits (401), Expect = 3e-41
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 8/179 (4%)
Frame = +1
Query: 163 MSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAG 336
M+SQ VL E ++ I+TLNRPK LN+L +M+S+LL + +E+ S LVI+KG G
Sbjct: 1 MASQS-QVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQG 59
Query: 337 EKAFCAGGDVKAAIDKIE------GPRFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLG 498
+AFCAGGDV + + G FF +Y +N+++ Y P ++ +NGI MG G G
Sbjct: 60 -RAFCAGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAG 118
Query: 499 LSVHGRYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGDRLKGKDVV 675
+S+HGR+R+ATE T+ AMPET +GLFPDVG S+FL RL G Y+GLTG RL G +++
Sbjct: 119 VSIHGRFRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELL 177
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 671 LXKAGIATHFVPSKRLYELE 730
L G+ATHFVPS RL LE
Sbjct: 176 LLACGLATHFVPSTRLTALE 195
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 156 bits (378), Expect = 2e-38
Identities = 80/172 (46%), Positives = 112/172 (65%), Gaps = 8/172 (4%)
Frame = +1
Query: 184 VLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAGEKAFCAG 357
VL E ++ I+T NRPK LN+L+ MVS+LL +E+ S LV++KG G +AF AG
Sbjct: 51 VLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQG-RAFSAG 109
Query: 358 GDVKAAIDKI------EGPRFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLGLSVHGRY 519
GD+ + I G +F Y +N+++ Y+ P ++ +NGI MGGG GLS +GR+
Sbjct: 110 GDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRF 169
Query: 520 RVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGDRLKGKDVV 675
R+ATE T+ AMPET +GLFPDVG S+FL RL G Y+GLTG RL G +++
Sbjct: 170 RIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEML 221
>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
protein similar to enoyl-CoA-hydratase, Avicennia
marina, EMBL:AF190450 [GI:6014701], CoA-thioester
hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 401
Score = 138 bits (335), Expect = 3e-33
Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 8/183 (4%)
Frame = +1
Query: 151 LRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VII 324
L+ T + VL E + LNRP ALN+L T M +L + WE+ ++ V++
Sbjct: 28 LKLTSEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMM 87
Query: 325 KGAGEKAFCAGGDVKAAID-KIEGP-----RFFHTEYNVNFLIGNYKIPYIAFINGITMG 486
KG+G +AFCAGGD+ + + G FF + Y+ +L+G Y P++A +NG+TMG
Sbjct: 88 KGSG-RAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMG 146
Query: 487 GGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGDRLKGK 666
GG G+S+ G +RVAT++T+ A PET IG PD G SF L L LG YLGLTG +L G
Sbjct: 147 GGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGA 206
Query: 667 DVV 675
+++
Sbjct: 207 EML 209
>At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 418
Score = 138 bits (335), Expect = 3e-33
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 11/163 (6%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKAA 375
N ++TL+RPKALN++N M K L EWE + V+++G+ +AFCAG D+K
Sbjct: 54 NGVALITLDRPKALNAMNLEMDLKYKSLLDEWEYDPGVKCVVVEGSTSRAFCAGMDIKGV 113
Query: 376 I-----DKIEG--PRFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATE 534
+ DK + F EY++ I Y+ PYI+ ++GITMG GLGLS HGRYRV TE
Sbjct: 114 VAEILMDKNTSLVQKVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITE 173
Query: 535 KTLIAMPETKIGLFPDVGGSFFLPRL--QVNLGLYLGLTGDRL 657
+T++AMPE IGLFPDVG S+ + ++G YLG+TG R+
Sbjct: 174 RTVLAMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLGMTGRRI 216
>At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family
protein similar to CoA-thioester hydrolase CHY1
(beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis
thaliana] GI:8572760; contains Pfam profile PF00378:
enoyl-CoA hydratase/isomerase family protein
Length = 381
Score = 136 bits (330), Expect = 1e-32
Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 11/163 (6%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSL--VIIKGAGEKAFCAGGDVKAA 375
N ++TL+R KALN++N M K L EWE + VI++G+ +AFCAG D+K
Sbjct: 17 NGVALITLDRTKALNAMNLDMDIKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKGV 76
Query: 376 IDKIEGPR-------FFHTEYNVNFLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATE 534
+I+ + F EY + I YK PYI+ ++GITMG GLGLS HGRYRV TE
Sbjct: 77 AAEIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITE 136
Query: 535 KTLIAMPETKIGLFPDVGGSFFLPRLQ--VNLGLYLGLTGDRL 657
+T++AMPE IGLFPDVG S+ ++G YLGLTG R+
Sbjct: 137 RTVLAMPENGIGLFPDVGFSYIAAHSPGGGSVGAYLGLTGKRI 179
>At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 409
Score = 131 bits (317), Expect = 4e-31
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 8/188 (4%)
Frame = +1
Query: 136 ATLPLLRRTMSSQEPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSK-- 309
+ LP + + E VL E + LN P +LN+L+ MV +L + WE++
Sbjct: 27 SALPNYSASDADFEDQVLVEGKAKSRAAILNNPSSLNALSAPMVGRLKRLYESWEENPAI 86
Query: 310 SLVIIKGAGEKAFCAGGDVKAAIDKI------EGPRFFHTEYNVNFLIGNYKIPYIAFIN 471
S V++KG+G K FC+G DV + I E FF Y +L G Y P IA ++
Sbjct: 87 SFVLMKGSG-KTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMD 145
Query: 472 GITMGGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGD 651
G+TMG G G+S+ G +RVAT+KT++A PE +IG PD G S++L RL LG YL LTG
Sbjct: 146 GVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLALTGQ 205
Query: 652 RLKGKDVV 675
+L G +++
Sbjct: 206 KLNGVEMI 213
>At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 387
Score = 117 bits (282), Expect = 7e-27
Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Frame = +1
Query: 175 EPDVLFEALNNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAGEKAF 348
EP V+ E + + TLNRP+ LN ++ +V KL L+ WEK L++IKG G +AF
Sbjct: 10 EPVVIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTG-RAF 68
Query: 349 CAGGDVKAAIDKIEGP----RFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLGLSVHGR 516
AGGD+K E + Y + + I YK ++ +NGI+MGGG L V +
Sbjct: 69 SAGGDLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMK 128
Query: 517 YRVATEKTLIAMPETKIGLFPDVGGSFFLPRLQVNLGLYLGLTGDRLKGKDVV 675
+ V TEKT+ A PE G D G S+ RL +LG +L LTG RL GK++V
Sbjct: 129 FSVVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELV 181
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 665 KTLXKAGIATHFVPSKRLYELEMLL 739
K L G+ATHFVPS +L +LE L
Sbjct: 178 KELVAIGMATHFVPSGKLMDLEARL 202
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +1
Query: 214 IVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKS--LVIIKGAGEKAFCAGGDVKAAIDKI 387
++T+NRPK+LNSL +M+ L ++ + +S +VI G+G ++FC+G D+ AA
Sbjct: 21 VITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSG-RSFCSGVDLTAAESVF 79
Query: 388 EGPRFFHTEYNVNFLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATEKTLIAMPETKI 567
+G E + + + P I ING + G L++ VA+ +
Sbjct: 80 KGD-VKDPETDPVVQMERLRKPIIGAINGFAITAGFELALACDILVASRGAKFMDTHARF 138
Query: 568 GLFPDVGGSFFLPRL 612
G+FP G S L R+
Sbjct: 139 GIFPSWGLSQKLSRI 153
>At1g60550.1 68414.m06816 naphthoate synthase, putative /
dihydroxynaphthoic acid synthetase, putative / DHNA
synthetase, putative contains similarity to MENB from
Escherichia coli [SP|P27290], Bacillus subtilis
[SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 337
Score = 55.6 bits (128), Expect = 3e-08
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Frame = +1
Query: 181 DVLFEALNNAGI--VTLNRPKALNSLNTSMVSKLLPQLQEW--EKSKSLVIIKGAGEKAF 348
D+++E + GI +T+NRP+ N+ V +L+ + + S ++I+ G G KAF
Sbjct: 76 DIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAF 135
Query: 349 CAGGDVKAAIDKIEGPRFFHTEYNVNFL-----IGNYKIPYIAFINGITMGGGLGLSVHG 513
C+GGD A+ +G + +N L I P IA + G +GGG L +
Sbjct: 136 CSGGD--QALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVC 193
Query: 514 RYRVATEKTLIAMPETKIGLFPDVGGSFFLPRL 612
+A + + K+G F GS + RL
Sbjct: 194 DLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRL 226
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 55.2 bits (127), Expect = 4e-08
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKS---KSLVIIKGAGEKAFCAGGDVKA 372
+ ++T++ P +NSL + ++S L + ++ + K++V+I G F G D+
Sbjct: 14 DGVAVITISNPP-VNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR--FSGGFDINV 70
Query: 373 --AIDKIEGPRFFHTEYNVNF---LIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATEK 537
+ K G E +V L+ + + P +A + G+ +GGGL L++ RVA K
Sbjct: 71 FQQVHKT-GDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVAAPK 129
Query: 538 TLIAMPETKIGLFPDVGGSFFLPRL 612
+ +PE +G+ P GG+ LPRL
Sbjct: 130 AQLGLPELTLGVIPGFGGTQRLPRL 154
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +1
Query: 298 EKSKSLVIIKGAGEKAFCAGGDVKAAIDKIEGPRFFHTEYN-VNFL---IGNYKIPYIAF 465
+ S +V+I+ FCAG D+K + P HT N + ++ I IP IA
Sbjct: 15 DNSARVVMIRSLVPGVFCAGADLKER--RTMSPSEVHTYVNSLRYMFSFIEALSIPTIAA 72
Query: 466 INGITMGGGLGLSVHGRYRVATEKTLIAMPETKIGLFPDVGGSFFLPRL 612
I G +GGGL +++ R+ E + +PET + + P GG+ L RL
Sbjct: 73 IEGAALGGGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRL 121
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 50.8 bits (116), Expect = 9e-07
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Frame = +1
Query: 202 NNAGIVTLNRPKALNSLNTSMVSKLLPQLQEWEKSKSLVIIKGAGEKAFCAGG-DVKAAI 378
+ ++TL P +NSL+ ++ L +E + I G K +GG D+
Sbjct: 16 DGVAVITLINPP-VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFG 74
Query: 379 DKIEG----PRFFHTEYNV-NFLIGNYKIPYIAFINGITMGGGLGLSVHGRYRVATEKTL 543
+ +G P+ + ++ L+ + P +A I+G+ +GGGL L++ R++
Sbjct: 75 EMQKGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQ 134
Query: 544 IAMPETKIGLFPDVGGSFFLPRL-QVNLGLYLGLTGDRLKGKD 669
+ +PE ++G+ P GG+ LPRL + L + LT +K ++
Sbjct: 135 LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEE 177
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 37.5 bits (83), Expect = 0.009
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Frame = +1
Query: 223 LNRPKALNSLNTSMVSKLLPQLQEWEKSK--SLVIIKGAGEKAFCAGGDV--------KA 372
+NRP LN+L+ + L +++ S++I+ GAG K FC+G D+ ++
Sbjct: 25 INRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAG-KHFCSGIDLNSLSSISTQS 83
Query: 373 AIDKIEGPRFFHTEYNVNFL------IGNYKIPYIAFINGITMGGGLGLSVHGRYRVATE 534
+ G + + I + P IA I+G +GGG+ L R +E
Sbjct: 84 SSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSE 143
Query: 535 KTLIAMPETKIGLFPDVGGSFFLPRL-QVNLGLYLGLTGDRLKGKD 669
++ E + + D+G LP + + L LT R G +
Sbjct: 144 DAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSE 189
>At3g52410.1 68416.m05764 hypothetical protein contains Pfam profile
PF03778: Protein of unknown function (DUF321)
Length = 206
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 295 WEKSKSLVIIKGAGEKAFCAGGDVKAAI--DKIEGPRFFHTEYNVNFLIGNYKIPYIAFI 468
W K+ + G + + GG + KI G RF+ Y FL GNY ++A
Sbjct: 81 WRKNLGFTFLAGKS-RVYVFGGKITGLRFWKKIMGLRFWRKNYGFPFLAGNYGFTFLAGK 139
Query: 469 NGITMGGG 492
+ + + GG
Sbjct: 140 SLVYVFGG 147
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 536 FSVATLYLPWTESPRPPPIVIPFINAIY 453
++++ PW+ SP+P P P I+A+Y
Sbjct: 43 YTISPQLPPWSSSPQPSPCPSPSISAVY 70
>At1g07750.1 68414.m00837 cupin family protein similar to legumin
(11S-globulin) from Ginkgo biloba [GI:949869], 11S
globulin from Avena sativa [GI:472867]
Length = 356
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 413 SVWKNLGPSILSMAAFTSPPAQKAF 339
SVWK+L P +L A +P +K+F
Sbjct: 317 SVWKSLSPEVLQAAFKVAPEVEKSF 341
>At3g57830.1 68416.m06447 leucine-rich repeat transmembrane protein
kinase, putative several receptor-like protein kinases
Length = 662
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 635 KYNPKLTCKRGKKNDPPTSGNSPILVSGMAINVFSVA 525
K NP K G+KN P T + L+SG++I + +V+
Sbjct: 257 KPNPSFIDKDGRKNKPITGSVTVSLISGVSIVIGAVS 293
>At2g28680.1 68415.m03486 cupin family protein similar to legumin
(11S-globulin) from Ginkgo biloba [GI:949869], 11S
globulin from Avena sativa [GI:472867]; contains a 11-S
plant seed storage protein signature (PS00305)
Length = 356
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 413 SVWKNLGPSILSMAAFTSPPAQKAF 339
SVWK L P +L A P +KAF
Sbjct: 317 SVWKALSPEVLQAAFKVDPEVEKAF 341
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,185
Number of Sequences: 28952
Number of extensions: 344510
Number of successful extensions: 941
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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