Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0683
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5715D Cluster: PREDICTED: similar to CG13643-PA...    34   2.8  
UniRef50_A0US61 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI000023CA70 Cluster: hypothetical protein FG01071.1; ...    33   8.4  
UniRef50_A6S4T6 Cluster: Putative uncharacterized protein; n=2; ...    33   8.4  

>UniRef50_UPI0000D5715D Cluster: PREDICTED: similar to CG13643-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13643-PA - Tribolium castaneum
          Length = 815

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 21/57 (36%), Positives = 27/57 (47%)
 Frame = +1

Query: 505 APANNYDESGEDDGQYRPPQGEDDGLYRPELYDRELLSGAHSLNIAASGNRLPEERK 675
           A +N +DE+  DDG Y P    +D          E L  AHS NIA+S N   +  K
Sbjct: 693 ARSNRFDETQYDDGSYNPKYDRNDD---------EFLKTAHSQNIASSRNEYSKSTK 740


>UniRef50_A0US61 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia multivorans ATCC 17616|Rep: Putative
           uncharacterized protein - Burkholderia multivorans ATCC
           17616
          Length = 455

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  AAPKVNKKQGLVELYNNEGQSTAGYNLQNDNRS-FKVRNGFNVDEAPR 198
           A PK N+K GL  L+ + GQ TAGY + N+NRS F+V    N   A R
Sbjct: 246 AGPK-NEKAGL--LFESAGQRTAGYYVFNENRSLFEVLLHANHGSAQR 290


>UniRef50_UPI000023CA70 Cluster: hypothetical protein FG01071.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG01071.1
            - Gibberella zeae PH-1
          Length = 2360

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 448  PEPPANLNKVAYNTNIGFNAPANNYDESGED-DGQYRPPQGED 573
            P PP  +N V+  T+   +A    YD S    DG YRPP   D
Sbjct: 1390 PTPPLLVNNVSMRTSPPSSASRLGYDPSNSAYDGGYRPPSAND 1432


>UniRef50_A6S4T6 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 727

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 442 YRPEPPAN-LNKVAYNTNIGFNAPANNYDESGEDDGQYRPPQ 564
           Y P  PA  +   + +   G N P NNY +  +  GQ+ PPQ
Sbjct: 166 YNPHNPAPYIGPPSGSQGPGHNGPPNNYPQQWQQQGQHGPPQ 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.307    0.128    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,269,761
Number of Sequences: 1657284
Number of extensions: 10891266
Number of successful extensions: 23104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23072
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)