Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0683
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   5.1  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   5.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 647 LAAIFKECAPDRSSLSY 597
           +A++F EC PD  +++Y
Sbjct: 837 IASVFNECRPDAETVAY 853


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 469 NKVAYNTNIGFNAPANNYDESGEDD 543
           N + +  NI  NAP++   + GEDD
Sbjct: 111 NAIPFTFNISPNAPSSVTLQQGEDD 135


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 469 NKVAYNTNIGFNAPANNYDESGEDD 543
           N + +  NI  NAP++   + GEDD
Sbjct: 111 NAIPFTFNISPNAPSSVTLQQGEDD 135


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 559 PQGEDDGLYRPELYDRELLSGAHSLNIAASGNRLPEERK 675
           P G D+G   P   D ++ S    L   A   R+P  R+
Sbjct: 186 PGGTDNGRRTPTWLDLDIYSMQKFLETVAGPLRIPSHRR 224


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 445  RPEPPANLNKVAYNTNIGFNAPANNYDESGEDDGQYRPPQGEDDGLYRPELYDRELLSGA 624
            R E P+ LN+ + + N+   +   + D     D QY PP G  D       +++ LL  +
Sbjct: 1006 RLESPS-LNESSLSPNLWHGSIETSTDTLVPVD-QYPPPLGPIDTSALSTHHEQNLLPTS 1063

Query: 625  HSL 633
            HSL
Sbjct: 1064 HSL 1066


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 581 CIDRSCMTESFCLERIL*ILQP 646
           C+DRSC  E +  +R++ + +P
Sbjct: 463 CLDRSCFPEQWKKQRLVLLPKP 484


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 445  RPEPPANLNKVAYNTNIGFNAPANNYDESGEDDGQYRPPQGEDDGLYRPELYDRELLSGA 624
            R E P  LN+ + + N+   +   + D     D QY PP G  D       +++ LL  +
Sbjct: 1004 RLESPG-LNESSLSPNLWHGSIETSTDTLVPVD-QYPPPLGPIDTSALSTHHEQNLLPTS 1061

Query: 625  HSL 633
            HSL
Sbjct: 1062 HSL 1064


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.307    0.128    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,784
Number of Sequences: 2352
Number of extensions: 11345
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)