Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0681
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.61 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +1

Query: 79  VKTGRSIKELEDEMLNGQKLQGPITAEEVNHMLAN 183
           +K+ R+ K+L+D+ +N    +  +    ++H+L N
Sbjct: 187 IKSERNGKDLDDDDMNDDDRKDDLLGNNMHHILGN 221


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +1

Query: 337 ASAECLFTPPALIISYSTKCIYFVHAAKNTVLKKYI 444
           +++  L+TP + I  Y+T  +   + + ++V   YI
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYI 67


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +1

Query: 337 ASAECLFTPPALIISYSTKCIYFVHAAKNTVLKKYI 444
           +++  L+TP + I  Y+T  +   + + ++V   YI
Sbjct: 32  STSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYI 67


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 566 QLIHTYYTTSF 598
           QLIH YYT  F
Sbjct: 111 QLIHVYYTVVF 121


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 566 QLIHTYYTTSF 598
           QLIH YYT  F
Sbjct: 111 QLIHVYYTVVF 121


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 566 QLIHTYYTTSF 598
           QLIH YYT  F
Sbjct: 431 QLIHVYYTVVF 441


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 199  KFPLFTAVFRICRGELKPN 255
            ++PL   + R+ RG  KP+
Sbjct: 2178 EYPLLRTINRVLRGYAKPD 2196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,288
Number of Sequences: 336
Number of extensions: 3468
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)