Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0681
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...   159   2e-41
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.6  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score =  159 bits (386), Expect = 2e-41
 Identities = 71/98 (72%), Positives = 82/98 (83%)
 Frame = +1

Query: 1   FFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKLQGPITAEEVNHMLA 180
           FFESCGVADLI TCYGGRNR++ EAFVKTG+ I ELE EMLNGQKLQGP TAEEVN+ML 
Sbjct: 253 FFESCGVADLIATCYGGRNRKICEAFVKTGKKISELEKEMLNGQKLQGPFTAEEVNYMLK 312

Query: 181 NKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 294
            KNMEN+FPLFT V RIC GE  P + I+ +R+HPE++
Sbjct: 313 AKNMENRFPLFTTVHRICIGETMPMELIENLRNHPEYI 350


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 372 KCRWSEETLSRGSSVGSQ*TFDQGQFHVFRVTANAINKVVRFEFSATDAEHRSEQREL-V 196
           +C+WS +   R     S   FD    H+F   +N I  +  F    +    R+ +  L  
Sbjct: 154 ECKWSRKGFLRTRWSISGTVFDLINIHLFHDASNFI-AMETFPSVYSKTRRRALEHTLDR 212

Query: 195 FHIFISEHMVYFLRGD 148
           FH     ++ YFL GD
Sbjct: 213 FHNDKYSNVPYFLFGD 228


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 150 HRGGSKPYAR**KYGKQVPFVHCGVPHLSRRTQTERLY*LHSQSPGT 290
           HRG S  +    ++G        G PH     QT+ L  LH + P T
Sbjct: 329 HRGSSPHH----QHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPT 371


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +1

Query: 169 HMLANKNM---ENKFPLFTAVFRICRGELKPNDFIDCIRSHPE 288
           H++ N+++   +    +   + ++C G  K ND +  +R H E
Sbjct: 218 HLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRPHLE 260


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +1

Query: 169 HMLANKNM---ENKFPLFTAVFRICRGELKPNDFIDCIRSHPE 288
           H++ N+++   +    +   + ++C G  K ND +  +R H E
Sbjct: 218 HLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRPHLE 260


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 QKLQGPITAEEVNHMLAN 183
           ++L  P+T   + H+LAN
Sbjct: 8   EELLSPLTLNRITHILAN 25


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 130 QKLQGPITAEEVNHMLAN 183
           ++L  P+T   + H+LAN
Sbjct: 46  EELLSPLTLNRITHILAN 63


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 625 KYYSNQTKTKRSSIISVD*LAIKSHEVKCT 536
           K      K  RS +  +    ++SHEV+CT
Sbjct: 673 KLTETNPKLARSVLYKIYLNTMESHEVRCT 702


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,106
Number of Sequences: 438
Number of extensions: 3380
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)