BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0680 (700 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 4.9 AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 4.9 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.9 AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 6.4 AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.4 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.5 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 22.2 bits (45), Expect = 4.9 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 121 IWIKENRRKRGKGEGKVARASFVGRQGAPRAG 26 IW+ + R R KG+G G G PR G Sbjct: 131 IWVPQKYRLRHKGDGS------PGGNGGPRNG 156 >AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. Length = 316 Score = 22.2 bits (45), Expect = 4.9 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = +1 Query: 610 RRTERVYLPPKTHLFRCYECNWESE 684 + +R+YL P+T + Y+ N E++ Sbjct: 20 KNDKRIYLSPRTPIKNVYKNNIETK 44 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 22.2 bits (45), Expect = 4.9 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 121 IWIKENRRKRGKGEGKVARASFVGRQGAPRAG 26 IW+ + R R KG+G G G PR G Sbjct: 131 IWVPQKYRLRHKGDGS------PGGNGGPRNG 156 >AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate receptor 1 protein. Length = 843 Score = 21.8 bits (44), Expect = 6.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 563 QGSDMRFVAHLFLKKRGERNVCI 631 +GS + +F ++ ERNVCI Sbjct: 147 EGSYGEYGIEVFTREATERNVCI 169 >AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate receptor protein. Length = 933 Score = 21.8 bits (44), Expect = 6.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 563 QGSDMRFVAHLFLKKRGERNVCI 631 +GS + +F ++ ERNVCI Sbjct: 237 EGSYGEYGIEVFTREATERNVCI 259 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 21.4 bits (43), Expect = 8.5 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +3 Query: 195 LSSQPHPTLLPRIVGYD*QNVLRS 266 L P +LLP VGY +++ +S Sbjct: 393 LEDAPQNSLLPNFVGYKGKHIGKS 416 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 162,455 Number of Sequences: 438 Number of extensions: 2935 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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