Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0678
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     27   0.82 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.4  
EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.          25   2.5  
EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.          25   3.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.6  

>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 701 RGPKT-TMVPGFNTPVSTLPTGTVPIPPILYTSCRG 597
           R P T T  PG   P+S L  G V   P  YT+  G
Sbjct: 447 RSPATLTPSPGIGGPISPLDPGNVTPTPPAYTTLGG 482


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 411  SWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 295
            ++V+AN L V   FLL   K  L + W+  +    S+DE
Sbjct: 927  AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965


>EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 584 SPCVFPCKTYTKSVVLVP 637
           +PC+ PCK + + V  +P
Sbjct: 23  NPCLCPCKPFEEKVYFIP 40


>EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 545 LSMPSCHLPAPLTSPCVFPCKTYTKSVVLVP 637
           LS P      P  +PC+ PCK + +    +P
Sbjct: 10  LSGPHTVDDIPQQNPCLCPCKPFEEKEYFIP 40


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +2

Query: 518 KLTENASLKLSMPSCHLPAP--LTSPCVFPCKTYTKSVVLVPCPSAELK 658
           +L   +   L +PSC LP P  +  P   P     KS     C  + L+
Sbjct: 90  ELVTRSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSSCSLSTLE 138


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 357  GNQEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQN 476
            G Q  +  I  + WLQ    + RA     RR+H  +F+ N
Sbjct: 982  GRQFSNEGISGQSWLQLQQQKLRARREQQRREHSNSFSYN 1021


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 562 PPARPTDKPLRLP 600
           P +RPT KP RLP
Sbjct: 289 PRSRPTSKPKRLP 301


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 331 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 423
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 676 LVSTHQFQLCRRARYQYHRFCIRLAGEDAGACQWGGQVAGWHR 548
           +  T+  +LC    +Q H    RL G   G+    G    +HR
Sbjct: 191 ITRTNAERLCSSLLHQAHELRPRLKGGGPGSALLNGSFRVYHR 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,288
Number of Sequences: 2352
Number of extensions: 20189
Number of successful extensions: 87
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)