Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0678
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 428 e-120
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 428 e-120
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 231 5e-98
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 206 1e-53
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 206 1e-53
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 204 4e-53
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 171 4e-43
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 103 1e-22
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 103 1e-22
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 99 2e-21
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 99 2e-21
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 99 2e-21
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 51 1e-06
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 48 9e-06
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 38 0.010
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.010
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.16
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.29
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.29
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.38
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.5
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 3.5
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 3.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 428 bits (1054), Expect = e-120
Identities = 197/234 (84%), Positives = 213/234 (91%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
DCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF E
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTE 169
Query: 361 IKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 540
I EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 170 ITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
Query: 541 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGPR 702
EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P+
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQ 283
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 500 WSVKKAKLTENASLKLSMPSCHLPA--PLTSPCVFPCKTYTK--SVVLVPCPSAELKLVC 667
W+V++ + + L +P P P P + K + VP E ++
Sbjct: 214 WAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
Query: 668 *NQVPLLSLAPXNITTEVKSXEMHHEA 748
V ++ AP N+TTEVKS EMHHE+
Sbjct: 274 PGMV--VTFAPQNVTTEVKSVEMHHES 298
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 428 bits (1054), Expect = e-120
Identities = 197/234 (84%), Positives = 213/234 (91%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
DCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF E
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTE 169
Query: 361 IKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 540
I EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 170 ITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
Query: 541 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGPR 702
EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P+
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQ 283
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 500 WSVKKAKLTENASLKLSMPSCHLPA--PLTSPCVFPCKTYTK--SVVLVPCPSAELKLVC 667
W+V++ + + L +P P P P + K + VP E ++
Sbjct: 214 WAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
Query: 668 *NQVPLLSLAPXNITTEVKSXEMHHEA 748
V ++ AP N+TTEVKS EMHHE+
Sbjct: 274 PGMV--VTFAPQNVTTEVKSVEMHHES 298
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 231 bits (565), Expect(2) = 5e-98
Identities = 103/136 (75%), Positives = 117/136 (86%)
Frame = +1
Query: 295 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 474
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 475 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 654
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 655 ETGVLKPGTIVVFGPR 702
ETG++KPG +V F P+
Sbjct: 234 ETGIIKPGMVVTFAPQ 249
Score = 144 bits (350), Expect(2) = 5e-98
Identities = 65/68 (95%), Positives = 68/68 (100%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 181 DCAVLIVA 204
DCAVL+VA
Sbjct: 110 DCAVLVVA 117
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 500 WSVKKAKLTENASLKLSMPSCHLPA--PLTSPCVFPCKTYTK--SVVLVPCPSAELKLVC 667
W+V++ + + L +P P P P + K + VP E ++
Sbjct: 180 WAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 239
Query: 668 *NQVPLLSLAPXNITTEVKSXEMHHEA 748
V ++ AP N+TTEVKS EMHHE+
Sbjct: 240 PGMV--VTFAPQNVTTEVKSVEMHHES 264
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 206 bits (504), Expect = 1e-53
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQA
Sbjct: 213 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 272
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 273 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 330
Query: 361 IKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 537
IK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ DG CL
Sbjct: 331 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCL 375
Query: 538 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 663
+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 376 LELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 206 bits (504), Expect = 1e-53
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQA
Sbjct: 231 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 290
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 291 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 348
Query: 361 IKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 537
IK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ DG CL
Sbjct: 349 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCL 393
Query: 538 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 663
+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 394 LELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 204 bits (499), Expect = 4e-53
Identities = 100/123 (81%), Positives = 107/123 (86%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQA
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQA 109
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
DCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R +
Sbjct: 110 DCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDT 166
Query: 361 IKK 369
I++
Sbjct: 167 IQR 169
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/100 (39%), Positives = 48/100 (48%)
Frame = +2
Query: 359 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENAS 538
+S + P +SRR T Q L D TETTC C GSRDG + +K L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 539 LKLSMPSCHLPAPLTSPCVFPCKTYTKSVVLVPCPSAELK 658
+L PS H A LT VF + T+S L P S L+
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 171 bits (416), Expect = 4e-43
Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 2/237 (0%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QA
Sbjct: 152 GRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQA 211
Query: 181 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 360
D AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD + E RF+E
Sbjct: 212 DLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKE 271
Query: 361 IKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 537
I+ +++ +++K+G+NP + +VP SG G + + T W G C
Sbjct: 272 IEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCF 321
Query: 538 IEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGPRQ 705
IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P +
Sbjct: 322 IEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKMESGCVQKGDTLVVMPNK 376
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 103 bits (247), Expect = 1e-22
Identities = 80/219 (36%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 211 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 390
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 391 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAIL 561
G+N GD P +G + EG+ D C LI+ALD++
Sbjct: 192 LHGFN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLP 230
Query: 562 PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
P R +P+ I G GTV VG +E GVLK G
Sbjct: 231 EPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 103 bits (247), Expect = 1e-22
Identities = 80/219 (36%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 211 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 390
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 391 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC---LIEALDAIL 561
G+N GD P +G + EG+ D C LI+ALD++
Sbjct: 192 LHGFN-------------GD-------ATPVIRGSALSALEGQ-DISCIERLIDALDSLP 230
Query: 562 PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
P R +P+ I G GTV VG +E GVLK G
Sbjct: 231 EPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 99 bits (238), Expect = 2e-21
Identities = 77/220 (35%), Positives = 116/220 (52%), Gaps = 4/220 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 211 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 384
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 385 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AI 558
+ + GY P P+ G + K P + G+ K L+E LD +
Sbjct: 197 LNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFV 242
Query: 559 LPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
+P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 243 IPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 281
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 99 bits (238), Expect = 2e-21
Identities = 77/220 (35%), Positives = 116/220 (52%), Gaps = 4/220 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 211 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 384
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 385 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AI 558
+ + GY P P+ G + K P + G+ K L+E LD +
Sbjct: 198 LNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFV 243
Query: 559 LPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
+P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 244 IPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 99 bits (238), Expect = 2e-21
Identities = 77/220 (35%), Positives = 116/220 (52%), Gaps = 4/220 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 211 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 384
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 385 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD--AI 558
+ + GY P P+ G + K P + G+ K L+E LD +
Sbjct: 198 LNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFV 243
Query: 559 LPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
+P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 244 IPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +1
Query: 28 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 207
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 208 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 321
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Frame = +1
Query: 112 VTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 285
VT ID GH ++K I G + D +L++ A G G T+EH LA +L
Sbjct: 228 VTFIDLAGHEKYLKTTIFGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLH 280
Query: 286 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 465
V +V V K+D E + I + V S KK+ PI + D+++
Sbjct: 281 VPVYLV-VTKIDMCPANILEETMKNITRLVRS-AKKL----------PILVRNMDDVVHA 328
Query: 466 STKMPWFKG---WQVERKEGKADGKCLIEALDAILPPARPTDK--PLRLPLQDVYKIGGI 630
+ P K +QV EG L+ I+P R ++ P + D+Y + G+
Sbjct: 329 AVNFPSKKVCPIFQVSNVEGT--NLPLLRQFLNIVPLRRQLNENDPAHFQIDDIYWVDGV 386
Query: 631 GTVPVGRVETGVLKPGTIVVFGP 699
GT+ G + +G ++ I++ GP
Sbjct: 387 GTIASGTLLSGTIRLNDILLLGP 409
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 47.6 bits (108), Expect = 9e-06
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 6/202 (2%)
Frame = +1
Query: 112 VTIIDAPGHRDFIKNMITGTSQA---DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 282
VT ID GH ++K I G + + +L++ A G G T+EH LA +L
Sbjct: 228 VTFIDLAGHEIYLKTTIFGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSL 280
Query: 283 GVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 462
V +V V K+D P Y EE K ++ ++ P V + N
Sbjct: 281 HVPVYLV-VTKIDMC-PAYI---LEETMKNITRLVRSAKKLPILVRNMDDCVHAAVNF-- 333
Query: 463 PSTKM-PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK--PLRLPLQDVYKIGGIG 633
PS K+ P F QV EG L+ ++P R ++ P + D+Y + G+G
Sbjct: 334 PSKKVCPIF---QVSNVEGT--NLPLLRQFLNMVPLRRQLNENDPAHFQIDDIYWVDGVG 388
Query: 634 TVPVGRVETGVLKPGTIVVFGP 699
T+ G + +G ++ I++ GP
Sbjct: 389 TIASGTLLSGTIRLNDILLLGP 410
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 47.2 bits (107), Expect = 1e-05
Identities = 54/194 (27%), Positives = 87/194 (44%)
Frame = +1
Query: 112 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 291
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 292 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 471
++I+ +NK D E + + E K+V +K +G + + PI +E S
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENS----PI--------VEMSL 170
Query: 472 KMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGR 651
+FK +E + K IE+ I P R + + + + I G GTV G
Sbjct: 171 ADGYFK------EEMLQNLKLAIES--RIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGT 222
Query: 652 VETGVLKPGTIVVF 693
V GVL+ T + F
Sbjct: 223 VIRGVLRLNTEIEF 236
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 177
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 178 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 321
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 211 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 321
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 28 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 207
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 208 GTG 216
G
Sbjct: 124 SAG 126
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAER 54
GKGSFKYAWVLDKLK +
Sbjct: 50 GKGSFKYAWVLDKLKVTK 67
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 109 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 288
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 289 KQLIVGVNKMDSTEPPYSEPRFEEI 363
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 201
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 201
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 314 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 186
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 34 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 198
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 199 VAAGTG 216
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 34 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 198
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 199 VAAGTG 216
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 118 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 297
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 298 IVGVNKMDSTEPPYSEPR 351
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 67 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 216
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 67 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 216
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 377 PHTSRRLATTQLLSLSCPFLD 439
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 377 PHTSRRLATTQLLSLSCPFLD 439
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 377 PHTSRRLATTQLLSLSCPFLD 439
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 377 PHTSRRLATTQLLSLSCPFLD 439
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 3.5
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 142 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 309
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 310 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 459
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 460 EPSTKMPWFKGWQVER 507
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.5
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 142 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 309
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 310 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 459
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 460 EPSTKMPWFKGWQVER 507
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 297 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 139
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 138 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 19
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 112 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 207
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,810,353
Number of Sequences: 27780
Number of extensions: 428058
Number of successful extensions: 1352
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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