Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0678
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 355 2e-98
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 355 2e-98
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 355 2e-98
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 355 2e-98
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 180 9e-46
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 169 2e-42
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 116 2e-26
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 115 3e-26
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 46 4e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 46 4e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 46 4e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 38 1e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 42 6e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 42 6e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 0.001
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 40 0.001
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 0.001
At5g13650.2 68418.m01585 elongation factor family protein contai... 38 0.005
At5g13650.1 68418.m01584 elongation factor family protein contai... 38 0.005
At2g31060.1 68415.m03790 elongation factor family protein contai... 38 0.005
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.005
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.029
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.029
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 36 0.038
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.27
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 1.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.5
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.5
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 29 3.3
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 29 3.3
At2g39560.1 68415.m04853 expressed protein 29 4.4
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.8
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.8
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.8
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.6
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 7.6
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.6
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 355 bits (872), Expect = 2e-98
Identities = 170/232 (73%), Positives = 192/232 (82%)
Frame = +1
Query: 4 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 183
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 184 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 363
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 364 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 543
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+E
Sbjct: 171 IKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLE 218
Query: 544 ALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGP 699
ALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 683 LLSLAPXNITTEVKSXEMHHEA 748
+++ AP +TTEVKS EMHHE+
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHES 286
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 355 bits (872), Expect = 2e-98
Identities = 170/232 (73%), Positives = 192/232 (82%)
Frame = +1
Query: 4 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 183
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 184 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 363
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 364 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 543
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+E
Sbjct: 171 IKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLE 218
Query: 544 ALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGP 699
ALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 683 LLSLAPXNITTEVKSXEMHHEA 748
+++ AP +TTEVKS EMHHE+
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHES 286
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 355 bits (872), Expect = 2e-98
Identities = 170/232 (73%), Positives = 192/232 (82%)
Frame = +1
Query: 4 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 183
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 184 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 363
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 364 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 543
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+E
Sbjct: 171 IKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLE 218
Query: 544 ALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGP 699
ALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 683 LLSLAPXNITTEVKSXEMHHEA 748
+++ AP +TTEVKS EMHHE+
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHES 286
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 355 bits (872), Expect = 2e-98
Identities = 170/232 (73%), Positives = 192/232 (82%)
Frame = +1
Query: 4 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 183
K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51 KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQAD 110
Query: 184 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 363
CAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI
Sbjct: 111 CAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 170
Query: 364 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 543
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+E
Sbjct: 171 IKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLE 218
Query: 544 ALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGP 699
ALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V F P
Sbjct: 219 ALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 683 LLSLAPXNITTEVKSXEMHHEA 748
+++ AP +TTEVKS EMHHE+
Sbjct: 265 VVTFAPTGLTTEVKSVEMHHES 286
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 180 bits (438), Expect = 9e-46
Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 180
GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 181 DCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 357
D A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFD 399
Query: 358 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWQVERKEGKADGKC 534
IK+ V S+++ + +++ ++P+S N++ PS W G C
Sbjct: 400 LIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPC 449
Query: 535 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFGP 699
L++A+D++ P R KPL +P+ D + G V G++E G ++PG+ V+ P
Sbjct: 450 LLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMP 505
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 169 bits (410), Expect = 2e-42
Identities = 95/235 (40%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Frame = +1
Query: 10 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 189
S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD
Sbjct: 147 SWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIG 206
Query: 190 VLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 369
VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++
Sbjct: 207 VLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQ 266
Query: 370 EVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKCLI 540
++ ++K GYN V F+PISG G NM + + PW W G
Sbjct: 267 KMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W---------SGPSFF 314
Query: 541 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFGPRQ 705
E LD+I P R + P R+P+ D +K +GTV +G+VE+G ++ G +V P +
Sbjct: 315 EVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNK 367
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 116 bits (278), Expect = 2e-26
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 2/227 (0%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 211 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 390
G QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 165 DGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
Query: 391 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP-P 567
G + + +S G N + G+ L++A+D +P P
Sbjct: 218 FPGDDIPIIRGSALSALQGTN-----------------DEIGRQAILKLMDAVDEYIPDP 260
Query: 568 ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFGPRQ 705
R DKP +P++DV+ I G GTV GR+E GV+K G + + G R+
Sbjct: 261 VRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLRE 307
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 115 bits (277), Expect = 3e-26
Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 211 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 390
G QT+EH LLA +GV ++V +NK D + E ++ EV +
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD---DAELLELVELEVRELLS 226
Query: 391 KIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKC--LIEALDAILP 564
+N +PI +E T+ P +V+R + K K L++A+D +P
Sbjct: 227 SYEFNGDD---IPIISGSALLAVETLTENP-----KVKRGDNKWVDKIYELMDAVDDYIP 278
Query: 565 -PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFGPRQ 705
P R T+ P L ++DV+ I G GTV GRVE G +K G T+ + G R+
Sbjct: 279 IPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRE 327
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +1
Query: 31 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 198
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 199 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVS 378
V A G EA QT + LA + ++I +NK+D P +EP E++ +E+
Sbjct: 183 VDASQG-VEA------QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIE 229
Query: 379 SYI 387
I
Sbjct: 230 EVI 232
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 211 TGEFEAGISKNGQTREH 261
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 211 TGEFEAGISKNGQTREH 261
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 38.3 bits (85), Expect(2) = 1e-04
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 183
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 184 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 363
A+L+V A G QT + LAF + ++ +NK+D P ++P E +
Sbjct: 161 GALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP--ERV 207
Query: 364 KKEVSS 381
K ++ S
Sbjct: 208 KAQLKS 213
Score = 24.6 bits (51), Expect(2) = 1e-04
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 499 VERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
V K G L ++ I PP ++ PLR+ L D + G + V G+L G
Sbjct: 225 VSAKTGLGLEHVLPAVIERIPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKG 284
Query: 679 TIVVFGPRQHHY 714
V F Y
Sbjct: 285 DKVSFAASGQSY 296
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +1
Query: 97 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 276
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 277 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 381
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +1
Query: 97 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 276
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 277 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 381
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 211 TG 216
G
Sbjct: 109 EG 110
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +1
Query: 109 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 288
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 289 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 381
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +1
Query: 91 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 258
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 259 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 387
H + +K +I+ NK+D + + + E I+K + + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/109 (32%), Positives = 46/109 (42%)
Frame = +1
Query: 28 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 207
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 208 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 354
G QTR A G ++V VNK+D P + P F
Sbjct: 180 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/109 (32%), Positives = 46/109 (42%)
Frame = +1
Query: 28 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 207
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 208 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 354
G QTR A G ++V VNK+D P + P F
Sbjct: 179 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 38.3 bits (85), Expect = 0.005
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Frame = +1
Query: 187 AVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 366
A+L+V AG G QT+ A G++ +++ +NK+D P +E R +E++
Sbjct: 5 AILVVDAGEGPL-------AQTKFVLAKALKYGLRPILL-LNKVD--RPSVTEERCDEVE 54
Query: 367 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 546
V G + F P+ L S K W K+ D K + +
Sbjct: 55 SLVFDLFANCGATEEQLDF-PV--------LYASAKEGWASSTYT--KDPPVDAKNMADL 103
Query: 547 LDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 678
LDA++ PP D+P + + + K +G + GRV +GV++ G
Sbjct: 104 LDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVG 151
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 31 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 210
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 211 TG 216
G
Sbjct: 196 AG 197
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 49 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 213
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 214 G 216
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 49 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 213
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 214 G 216
G
Sbjct: 245 G 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 35.5 bits (78), Expect = 0.038
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 112 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 291
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 292 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS---YIKKIGYNPAAV 417
++V +NK D P + P E++K +++S ++ IG N AV
Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTSEGIELEDIGGNVQAV 361
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 121 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 297
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 298 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 405
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 277 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 438
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 508 KEGKADGKCLIEALDAILPPARPTDKP 588
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 118 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 297
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 298 IVGVNKMD 321
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 112 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 291
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 292 QLIVGVNKMD 321
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 118 IIDAPGHRDFIKNMITGTSQADCAVLIV 201
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 118 IIDAPGHRDFIKNMITGTSQADCAVLIV 201
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 100 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 201
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Frame = +1
Query: 37 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 204
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 205 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 321
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 431 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 610
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 611 YTKSVV 628
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 431 FLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 610
FL+G+ T+ C+ S D K+ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 611 YTKSVV 628
TK VV
Sbjct: 77 -TKPVV 81
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 683 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 579
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 457 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 555
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 393 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 494
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 340 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 429
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +2
Query: 365 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVKKAKLTEN 532
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 533 ASLKLSMP 556
A KLSMP
Sbjct: 187 A--KLSMP 192
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 346 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 456
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 638 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 534
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 223 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 381
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,973,026
Number of Sequences: 28952
Number of extensions: 408569
Number of successful extensions: 1414
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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