Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0677
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA ...    73   6e-13
X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (d...    71   2e-12
AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p pro...    71   2e-12
AL021726-1|CAA16809.1| 1002|Drosophila melanogaster EG:171E4.1,F...    71   2e-12
AY089424-1|AAL90162.1|  553|Drosophila melanogaster AT24727p pro...    29   6.8  
AE013599-144|AAF57282.2|  553|Drosophila melanogaster CG14590-PA...    29   6.8  

>AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA
           protein.
          Length = 1002

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
 Frame = +1

Query: 142 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 300
           + +D   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDDEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 301 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIHQKSS------KL 453
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH   S      K+
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIHCLESPQAQQLKV 156

Query: 454 KFVSKIPNYEITEVGWNFENTSNNMTGPILLGTSKGHLLETELEPNND 597
           + + K  ++EIT V +N  + + + TGPILLGTS+G + ETEL P  D
Sbjct: 157 RRIEKFKDHEITAVAFNPYHGNESSTGPILLGTSRGLIFETELNPAAD 204


>X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (dor)
           protein.
          Length = 1002

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
 Frame = +1

Query: 142 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 300
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 301 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIHQKSS------KL 453
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH   S      K+
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIHCLESPQAQQLKV 156

Query: 454 KFVSKIPNYEITEVGWNFENTSNNMTGPILLGTSKGHLLETELEPNND 597
           + + K  ++EIT V +N  + + + TGPILLGTS+G + ETEL P  D
Sbjct: 157 RRIEKFKDHEITPVAFNPYHGNESSTGPILLGTSRGLIFETELNPAAD 204


>AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p
           protein.
          Length = 1002

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
 Frame = +1

Query: 142 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 300
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 301 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIHQKSS------KL 453
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH   S      K+
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIHCLESPQAQQLKV 156

Query: 454 KFVSKIPNYEITEVGWNFENTSNNMTGPILLGTSKGHLLETELEPNND 597
           + + K  ++EIT V +N  + + + TGPILLGTS+G + ETEL P  D
Sbjct: 157 RRIEKFKDHEITAVAFNPYHGNESSTGPILLGTSRGLIFETELNPAAD 204


>AL021726-1|CAA16809.1| 1002|Drosophila melanogaster
           EG:171E4.1,FBgn0000482;dor protein.
          Length = 1002

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
 Frame = +1

Query: 142 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 300
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 301 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIHQKSS------KL 453
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH   S      K+
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIHCLESPQAQQLKV 156

Query: 454 KFVSKIPNYEITEVGWNFENTSNNMTGPILLGTSKGHLLETELEPNND 597
           + + K  ++EIT V +N  + + + TGPILLGTS+G + ETEL P  D
Sbjct: 157 RRIEKFKDHEITAVAFNPYHGNESSTGPILLGTSRGLIFETELNPAAD 204


>AY089424-1|AAL90162.1|  553|Drosophila melanogaster AT24727p
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 659 DXPITGIKFSQGCRNKKVLXICDNXHQ 739
           + P+ G+  SQ C   K++  CD  HQ
Sbjct: 6   ECPVCGVAASQACTRCKMVRYCDREHQ 32


>AE013599-144|AAF57282.2|  553|Drosophila melanogaster CG14590-PA
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 659 DXPITGIKFSQGCRNKKVLXICDNXHQ 739
           + P+ G+  SQ C   K++  CD  HQ
Sbjct: 6   ECPVCGVAASQACTRCKMVRYCDREHQ 32


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,133,733
Number of Sequences: 53049
Number of extensions: 680184
Number of successful extensions: 1628
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)