Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0675
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    28   8.1  
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    28   8.1  
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    28   8.1  
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    28   8.1  
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    28   8.1  
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    28   8.1  

>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 445 DYYN*FKH-STFKSXRYCGCDSMINVDFDEATHSITRSCKXD*G*MYRDLILGYVKNPIP 621
           D+ N FK  STFKS  +   DS   +DF  A+ S++R    +    ++ L L Y  N   
Sbjct: 167 DWQNKFKKDSTFKSEFFSSADSKREIDFLHAS-SVSRDYAEN--DQFQVLSLPYKDNTFA 223

Query: 622 FAVF-QKDLSGKALSIKHITS 681
             +F  K   G   S+K + S
Sbjct: 224 LTIFLPKTRFGLTESLKTLDS 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,566,931
Number of Sequences: 27780
Number of extensions: 263808
Number of successful extensions: 525
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)