Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0673
(600 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.21
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 25 0.65
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 25 0.65
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.65
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.65
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 24 1.1
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.0
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.0
EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic hor... 21 7.9
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.21
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 226 GDHIHLHLKR--PTHQQQACYNIQTRSSSSCSY 134
GD+ L +R PTH Q N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLAPTHLQSP--NTQTHPSASCKY 101
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 24.6 bits (51), Expect = 0.65
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R KKRW +
Sbjct: 103 GKTKMIAHLKDKKKIRAKKRWSQ 125
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 24.6 bits (51), Expect = 0.65
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R KKRW +
Sbjct: 417 GKTKMIAHLKDKKKIRAKKRWSQ 439
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.65
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R KKRW +
Sbjct: 650 GKTKMIAHLKDKKKIRAKKRWSQ 672
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.65
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R KKRW +
Sbjct: 650 GKTKMIAHLKDKKKIRAKKRWSQ 672
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 195 QPTNSKPATTYKPAV 151
QP N KP T +KP V
Sbjct: 259 QPPNRKPRTDFKPQV 273
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 49 REIQSAMGGGGPLTRVRNGPRGNPSA 126
R A GGGG N P G PS+
Sbjct: 517 RSSDDAKGGGGGSGSGNNQPPGGPSS 542
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 555 CNKIPRMLNXHNALMRXIX*NNTKSXLXLV 466
CNKI ++N H L++ +N+ L L+
Sbjct: 227 CNKIKHLVNLHKNLVKVAKDHNSLYSLHLL 256
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R +KRW +
Sbjct: 678 GKTKMIAHLKDKMKIRHRKRWSQ 700
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R +KRW +
Sbjct: 678 GKTKMIAHLKDKMKIRHRKRWSQ 700
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R +KRW +
Sbjct: 678 GKTKMIAHLKDKMKIRHRKRWSQ 700
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
G+T+ +A L + ++R +KRW +
Sbjct: 678 GKTKMIAHLKDKMKIRHRKRWSQ 700
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 27 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 57
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 226 GDHIHLHLKRPTHQQQACYNIQTRSSSSCSY 134
GD+ L +R N QT S+SC Y
Sbjct: 71 GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101
>EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic
hormone 2 protein.
Length = 68
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 265 KRPPHQEANRCR 230
KR P E+NRC+
Sbjct: 29 KRAPEGESNRCK 40
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,651
Number of Sequences: 336
Number of extensions: 2291
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -