Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0673
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   0.81 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   3.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   5.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   10.0 

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 336 GRTR*MALLVPQSRLRKKKRWEE 268
           GRT+ +A L  ++++R KKRW +
Sbjct: 337 GRTKMIAHLKDKNKIRHKKRWSQ 359


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 255 PIKKQIDVEAEIIFIFTLNVQPTNSK 178
           P++++ +   E IF+ TLN  P  +K
Sbjct: 61  PLEQKTNAHIEKIFLITLNKNPQKNK 86


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 211 LHLKRPTHQQQACYNIQTRSSSSCSYKPRQ 122
           LHL+  T  Q   +    RSS+ C+ + RQ
Sbjct: 21  LHLRTYTSLQSIAFFSTRRSSAHCTQQTRQ 50


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 131 AQAEGFPRGPFRTLVRGPPPPIAD 60
           A AEG P+   +   RG PPP  D
Sbjct: 129 AAAEGAPKPQRKLSDRGEPPPKPD 152


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = -1

Query: 258 RPIKKQIDVEA 226
           RP+KKQ+D+EA
Sbjct: 162 RPLKKQLDLEA 172


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 110 RGPFRTLVRGPPPP 69
           RGP      GPPPP
Sbjct: 908 RGPGAAAATGPPPP 921


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,222
Number of Sequences: 2352
Number of extensions: 9500
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)