BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0673 (600 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 3.0 Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 4.0 DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.2 AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 9.2 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.2 >DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain protein protein. Length = 448 Score = 22.6 bits (46), Expect = 3.0 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -1 Query: 321 MALLVPQSRLRKKKRWEERSGRPIKKQIDVEA 226 +A +V S L + + +E + RP+ KQID A Sbjct: 321 IASVVKSSELAVRIQRQENNIRPMVKQIDTVA 352 >Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 protein. Length = 402 Score = 22.2 bits (45), Expect = 4.0 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -1 Query: 189 TNSKPATTYKPAVHQAAVT 133 T +KP + Y + H+AA+T Sbjct: 255 TKTKPTSPYHVSDHKAAIT 273 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 21.0 bits (42), Expect = 9.2 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 43 IRREIQSAMGGGGPLTR 93 IRR++ SA+GG P R Sbjct: 562 IRRKLGSALGGWHPSDR 578 >AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase protein. Length = 342 Score = 21.0 bits (42), Expect = 9.2 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -1 Query: 273 EERSGRPIKKQIDVEAEII 217 E+RSGRP++ D+ II Sbjct: 60 EKRSGRPVEVDDDLIKAII 78 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.0 bits (42), Expect = 9.2 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 39 EDPARNSIGNGGGRPPYEGAERAP 110 ED + GGRP E ER P Sbjct: 1350 EDESYRGPSASGGRPVPERPERVP 1373 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 140,039 Number of Sequences: 438 Number of extensions: 2742 Number of successful extensions: 6 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17604432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -