Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0671
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 45 2e-05
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 42 2e-04
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 31 0.46
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 31 0.46
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 30 0.81
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 0.81
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 29 1.4
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 29 1.9
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 29 1.9
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 28 3.3
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 28 3.3
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 28 3.3
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 27 4.3
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 27 4.3
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 7.5
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 7.5
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 27 7.5
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 27 7.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 7.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +2
Query: 83 ILDKCNDXIKWLDSNQLADKEEYEH 157
I DKC++ +KWLDSNQ A+KEE+EH
Sbjct: 571 IEDKCDEILKWLDSNQTAEKEEFEH 595
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 162 QKELEGIYNPIITNMYQ 212
QK+LEG+ NPII+ +YQ
Sbjct: 597 QKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2
Query: 83 ILDKCNDXIKWLDSNQLADKEEYE 154
I DKC++ +KWLDSNQ A+KEE+E
Sbjct: 571 IEDKCDEILKWLDSNQTAEKEEFE 594
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 30.7 bits (66), Expect = 0.46
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 RICTRXPEESPEVCRASRAEH-PEPEVPPPGLEALAPP 309
+I T SP V AS + P P +PPP ALAPP
Sbjct: 292 QISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 30.7 bits (66), Expect = 0.46
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 RICTRXPEESPEVCRASRAEH-PEPEVPPPGLEALAPP 309
+I T SP V AS + P P +PPP ALAPP
Sbjct: 292 QISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 98 NDXIKWLDSNQLADKEEYEHXTERIGRHLQS 190
++ ++WLDSN LA+K+E E + + QS
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQS 604
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 98 NDXIKWLDSNQLADKEEYEHXTERIGRHLQS 190
++ ++WLDSN LA+K+E E + + QS
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQS 604
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 217 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTTLKPT 357
P P + +A P P PPP L+A PP +K + PT
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 DKCNDXIKWLDSNQLADKEEYE 154
D D ++W++ N LADK+E E
Sbjct: 571 DAVEDTLRWMERNTLADKDEIE 592
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 256 EHPEPEVPPPGLEALAPPSXXSIKPTF 336
E P E PPG +PPS IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 256 EHPEPEVPPPGLEALAPPSXXSIKPTF 336
E P E PPG +PPS IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/51 (23%), Positives = 19/51 (37%)
Frame = -3
Query: 363 VTGRFKCGVECWFNRXXRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRXP 211
V ++ + W +R RWW + L LR + G+L P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/51 (23%), Positives = 19/51 (37%)
Frame = -3
Query: 363 VTGRFKCGVECWFNRXXRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRXP 211
V ++ + W +R RWW + L LR + G+L P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/51 (23%), Positives = 19/51 (37%)
Frame = -3
Query: 363 VTGRFKCGVECWFNRXXRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRXP 211
V ++ + W +R RWW + L LR + G+L P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 229 PEVCRASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTTL 348
P+V R +R HPE PPG + + PT HT L
Sbjct: 13 PKVPRLARQSHPE----PPGPSSSTSSTPLFTDPTIHTIL 48
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 217 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTTLKPTCNNHL 372
PE+S S P +P PG ++ APP + PT +T P +L
Sbjct: 197 PEKSEAEIALSLPVPPLTPLPSPGAQSTAPPVFPTSTPTPTSTPTPLLPGNL 248
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 241 RASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTT 345
R + PEP VPP APP+ S+ P F +
Sbjct: 23 RKRSSSKPEPPVPPK----FAPPAAPSVAPNFRAS 53
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 217 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 309
P SP+ S++ P P +PP + PP
Sbjct: 476 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 218 GXLVHIRNYRIVNAFQFFLXCAHTPPCRPA 129
G +V + N I+NA ++F+ A P CR A
Sbjct: 734 GSIVRVGNEYIINARKWFISNASHPKCRIA 763
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 220 EESPEVCRASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTTLKPT 357
+++P+V +A + E PE +VP P EA A PS + T + PT
Sbjct: 748 DDAPKVKKAKKEEVPEEKVPVP--EA-AGPSEVTAPLTIKIGMGPT 790
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 220 EESPEVCRASRAEHPEPEVPPPGLEALAPPSXXSIKPTFHTTLKPT 357
+++P+V +A + E PE +VP P EA A PS + T + PT
Sbjct: 761 DDAPKVKKAKKEEVPEEKVPVP--EA-AGPSEVTAPLTIKIGMGPT 803
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 217 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 309
P SP+ S++ P P +PP + PP
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,217,586
Number of Sequences: 27780
Number of extensions: 126464
Number of successful extensions: 572
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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